Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00219 ATGGAGGAAGTAGTGGAAGTAAAGGTAAGTGCTAGAGCGAGAGAACCTCAGAGTTTGAGTTCTCCAACAGTGGCAACTCCAAAAACTCCGAAAAGTCCTTTTGCATCTCGTTTCATGAACAGTGCTACTCCCTTAGCCAGCCCCATGAAGAAGGCCATTGAAAACATGCAAGGTTACTTTGGAGAAGTTGGTCGCTTCACCAAACTCGAGGATTGGCTTCCCATCACTGAGTCCAGGAAGGGAAACGCATACTACGCTGCGTTTCACGTTCTCTGTTCAGGAATCGGATTTCAGGCTCTTGTTCTTCCCTTGGCCTTCATCACTCTTGGCTGGAGTTGGGGAATGATATGTCTGTGTGTGGCATTTACATGGCAGCTGTACACGTTGTGGTTACTGATTCAGCTTCACGAATCGGACTCCGGGCTGCGCCATAGCAGGTACCTCAGACTTGCTATGGCAGCATTTGGAGAAAAGATGGGAAAATTATTGGCACTGTTCCCAATCATGTATTTATCGGGTGGGACGTGTGTGACACTGATCATGATGGGGGCTGGCACAATGAAGATATTCTTCCACGTGGTGTGCAGAGGGCCATGCCCTCTCACAACTATTGAGTGGTACTTGGTGTTTACATGCACAGCCATTTTGCTTGCCCAGTTACCAAACCTTAATTCAATCGCAGGGGTTTCACTCATTGGAGCCATCACTGCTGTGAGTTATTGTGCTCTTATATGGATAGTATCTGTAGTCAAAGGAAGACTTGATCATGTGTCATATGAGCCACCAAGGGTACAATCAGAAGCTAGCATGGTTTTTAGTGCGTGGAATGCGCTAGGCATCATTGCCTTTGCTTTCCGCGGTCACAATCTTGTGTTGGAGATACAGGGAACCATGCCTTCGGATGCAAAGCAACCCTCACGCTTGGCCATGTGGAGAGGTGTTATGTTTGCTTACCTAGTCATCGCTTTGTGTTTGTTCCCCCTTGCCATTGGGGGTTATTGGGCCTATGGAAATTTGATACCAAGCGGGGGGATGTTAGGTGCTTTGCACACATACCATGAACATGATACGTCAAAAATTATCATCGCTCTGACAAGCTTGCTAGTTGTCATAAACTGCATTAGTTCCTTCCAAATATATGCAATGCCAGTGTTTGATAACCTGGAATTCAGATACACTAGCAAGAAGAACAGACCTTGCCCGCGGTGGCTAAGAGTAGCCTTCAGGGGTCTCTTCGGCTGCCTAGCATTTTTTATTGCTGTAGCGTTGCCATTCTTACCAAGTTTGGCAGGTCTGATTGGAGGTGTTGCTTTACCAATAACCTTAGCTTACCCTTGTTTCATGTGGATACAAATTAAGAAACCACATAAATTTAGCATAAATTGGTACCTGAATTGGACACTAGGAGTTGTTGGGATGATTCTGAGCGTACTGGTTGTCATAGGAGCCATTTGGGGCATAGTTGCACAGGGCATAGAGATCCATTTCTTCGATCCACAGTAG 1503 0.4617 MEEVVEVKVSARAREPQSLSSPTVATPKTPKSPFASRFMNSATPLASPMKKAIENMQGYFGEVGRFTKLEDWLPITESRKGNAYYAAFHVLCSGIGFQALVLPLAFITLGWSWGMICLCVAFTWQLYTLWLLIQLHESDSGLRHSRYLRLAMAAFGEKMGKLLALFPIMYLSGGTCVTLIMMGAGTMKIFFHVVCRGPCPLTTIEWYLVFTCTAILLAQLPNLNSIAGVSLIGAITAVSYCALIWIVSVVKGRLDHVSYEPPRVQSEASMVFSAWNALGIIAFAFRGHNLVLEIQGTMPSDAKQPSRLAMWRGVMFAYLVIALCLFPLAIGGYWAYGNLIPSGGMLGALHTYHEHDTSKIIIALTSLLVVINCISSFQIYAMPVFDNLEFRYTSKKNRPCPRWLRVAFRGLFGCLAFFIAVALPFLPSLAGLIGGVALPITLAYPCFMWIQIKKPHKFSINWYLNWTLGVVGMILSVLVVIGAIWGIVAQGIEIHFFDPQ 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00219 500 MobiDBLite consensus disorder prediction 9 32 - -
Cca07g00219 500 MobiDBLite consensus disorder prediction 14 32 - -
Cca07g00219 500 Pfam Transmembrane amino acid transporter protein 80 488 IPR013057 -
Cca07g00219 500 PANTHER OS05G0424000 PROTEIN-RELATED 21 494 - -
Cca07g00219 500 PANTHER OSJNBA0084K11.20 PROTEIN 21 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00219 Cca-Chr7 2805493 2809826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00219 6 499 Organic Solute Cotransporters AT1G47670 56.400 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00219 - - gmx:100788860 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00219 07 2805493 2809826 Cca07g00219 07 2805493 2809826 ECH