Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00215 ATGGGCTGCAACACCTCCAAACTCGACCGGCTACCGGCAGTCGCGCTCTGCCGTGACCGTTGCAAATTCGTCGACGAAGCGCTTCGCCAAAGCTACGCCCTCGCCGACGCACACGTGGCACACATGGACTCCCTCAGAACACTAGGCCCCTCTTTCCTCTCTTTCTTCCAACATTTCGATCATTCCGATGATGTTAGTGTCCCAATTAAGGAAACAAAAACCAAATCTCCACCACCTCCTTCTCCTTCCTCCCTAAGTTCCGACTCCGACGCGCACCTTTGTCTGCATTCCGATTCCGAACCCGAAGACGCCCAAAAAGAACACTTCAAGTTGTTCCGTTACGAGGACGCTTTTTCTCCGCCGCGCTCCGGCGGCTACTCCGGTTTGAGGTcgccgtcgccgcctccgccgccgAGTAGCCCGGCGTGGGATTTCCTGAACTTCTTCGAGCCGTACGAGAGATACCACGTGCCGTACGTGGCTACCGGCGACGCTGACGTGGCGGAGAAGGAAAGGGGAAAGGTTCAGAAGGGTGACGTGTCTAAATCGACGGCGGAAAATGGAGGAGCGAAGAATAAGAAGGATAAGAAGGTGGTTTCGGAGAAAGAGGAAGTGGTGAAAGCGCAATGCAGTGACTCTGCGAAAGGATTCTCTGAGGCGGTGAAAGAGATTCAGATTTTGTTTGAGAGAGCGTCGGATTCTGGGAACGCGATTTTGGAGATGCTGGATGTTGGGAAACTCCGTTACCATAGAAAAATTGACCTCAATCCGGTTTCGTGCAAGATGATGCATGTGTTTACTCCTTCGTCAAGTCCTCGTGTGGGGAGAATGGGATCTGGGTATGAAGGAATTAGTAGTGACAAGGATCTCAGTTACGCTAATCTCTGTTCTACTCTCAAGAAGCTGTGTATGTGGGAGAAAAAGCTCTATCATGAAGTCAAGGCTGAGGAGAAACTGCGCATGCTTCATCAGAAGAAGTGTAAGCAGTTGAGATGTATGAAACAAAAGGATGCCGATGCACAGAAAATTGATTCTGTTCAAACGTTCATTAGGATTTTAGCTACAAAAATGAAAATGTCTATCCAAGTAGTTGACAAGATATCAATTACGATTAGTAAGTTGAGGGAAGAGGAGTTATGGCCGCAGATCAACAGATTTATTCTCACGTTTCTCGGAATGTGGAAGGATATGCAAGAATGTTACAAACGCCAATATCAGCAAATTGTTGAAGCCAAAACTTTAGACGCCTCATCGTTAAACAAAAAGCTTGGCAATGTTCATATTGATGCAACACTAAGACTGAAATCTGAGGTACAGAAATGGAATTTGAGCTTCTTAGATTGGATTCACGCCCAGAAGTCCCTTGTGAAAGCCTTGAATGGTTGGTTAGTAAGATGTCTATTATATGAACCTGAAGAAGTACCCGATGATTCAACTCCCTTCTCACCTAGCAAGATTGGTGCACCACCAGTGTTTGTGATCTGTAACAAATGGTCAAAAGCAGTGGATAATCTCTCAGATAGGAATGTCACTGAAGCCGTAAATGGGTTTATGCTGAGAGTGAATGAGCTCTTGGAAAAGCATATTTTAGACCTTCAACAAAAGCTAACACCGGACAAAGAATTGGAGAGAAAGGTGAAAATGTTGGAGAGGGAAGAGCAAAAGATGCACAAAGTGGTGAGGGCTCGAGAGAGAAAAATGGTTCAAGTTGGCAGAGAGGAATCTGATGCCCTGTTACGAGGGGATGCTGTGCATCATGCTGATATTGTTGATACTACTAACCTACAATCAGGTTTGAAGCATATCTTTGTTGCCATGGAGAAGTTCACTGATACCACAGCTCGCTTATATGAAGAACTTTCCCAACAAATTAAGCAAGAAGACCATGTTTTGGGAGAATCCCAACAAAAATAA 1914 0.4504 MGCNTSKLDRLPAVALCRDRCKFVDEALRQSYALADAHVAHMDSLRTLGPSFLSFFQHFDHSDDVSVPIKETKTKSPPPPSPSSLSSDSDAHLCLHSDSEPEDAQKEHFKLFRYEDAFSPPRSGGYSGLRSPSPPPPPSSPAWDFLNFFEPYERYHVPYVATGDADVAEKERGKVQKGDVSKSTAENGGAKNKKDKKVVSEKEEVVKAQCSDSAKGFSEAVKEIQILFERASDSGNAILEMLDVGKLRYHRKIDLNPVSCKMMHVFTPSSSPRVGRMGSGYEGISSDKDLSYANLCSTLKKLCMWEKKLYHEVKAEEKLRMLHQKKCKQLRCMKQKDADAQKIDSVQTFIRILATKMKMSIQVVDKISITISKLREEELWPQINRFILTFLGMWKDMQECYKRQYQQIVEAKTLDASSLNKKLGNVHIDATLRLKSEVQKWNLSFLDWIHAQKSLVKALNGWLVRCLLYEPEEVPDDSTPFSPSKIGAPPVFVICNKWSKAVDNLSDRNVTEAVNGFMLRVNELLEKHILDLQQKLTPDKELERKVKMLEREEQKMHKVVRARERKMVQVGREESDALLRGDAVHHADIVDTTNLQSGLKHIFVAMEKFTDTTARLYEELSQQIKQEDHVLGESQQK 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00215 637 MobiDBLite consensus disorder prediction 170 198 - -
Cca07g00215 637 PANTHER UNCHARACTERIZED 1 630 - -
Cca07g00215 637 Coils Coil 617 637 - -
Cca07g00215 637 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Cca07g00215 637 MobiDBLite consensus disorder prediction 69 100 - -
Cca07g00215 637 PANTHER F5M15.15 1 630 - -
Cca07g00215 637 Pfam Protein of unknown function (DUF632) 218 522 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00215 Cca-Chr7 2774484 2778295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00215 1 93 Acyl Lipid Metabolism Gene Families AT2G27090 34.737 6.39e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00215 - - ccaj:109802763 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00215 07 2774484 2778295 Cca07g00215 07 2774484 2778295 ECH