Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00208 ATGGGAGTAGTTTCCTTCTTCTCTGGCTCAGTCACTAACTGGTACCTATCTATCTGTGCAAAATCACGTGTGAACCTCATCCCCATTCCCCAGGTAGCAGAAGAATGCCGATGCTCCAAGGCCAACTCTGAAATCAGTGATAGCGGAAATAACTATTTGATCATGTATTCCTTGACAGTCAAACCCTTCTTAATACcttattcttcttcttcttcaacctctacttcctcctcttcAATTTCTCTCGCGTCCTTTCCATCTCGCTCGCTCTCATCAATTTGCTTTCCCAGAGATTTAAAGCACAGAGGAAGATTTGGTCTCAGAGTTGAAGCATATGATTCCTTCAATAATGACGCTTCCAACCCTACCAGTGCTGGCGACTCCAAACCCCCCAATGGCACTTTGTCAAAGAGCAGGAGAGAAATTTTACTGGAATATGTTAAGAACGTGCAGCCAGAATTTATGGAATTGTTTGTGAAAAGAGCGCCTCAACAGGTTGTGGATGCTATGCGACAAACAGTGACAAACATGATTGGAACACTGCCCCCTCAATTTTTTTCCGTAACAATTACCACTGTAGCTGAAAACCTTGCACAGCTCATGTACAGTGTCATGATGACTGGATACATGTTCAAGAATGCGCAATACCGTTTGGAGTTGCAAGAAAGTTTGGAAGAAGTTGTTGCCCTTCCGGATGTGCAAGATAAAAAGGATGTGCCAGACTATGCACCTGGGACACAAAAGAATGTTTCAGGTGAAGTCATTCGGTGGAACAATGTTTCTGGGCCTGAAAAAATAGATGCTAAAAAGTACATTGAATTACTTGAGGCAGAGATTGAGGAACTGAGTCGTCAAGTTGGGAGACAATCTAGCAATGCACAAAATGAACTGTTGGAATACCTCAAATCTCTTGAGCCTCGAAATTTGAAGGAGTTGACTAGTAGTGCTGGTGAGGACGTAGTGTTTGCTATGAATACATTTATAAAGCGCTTGCTGGCTGTTTCAGATCCTAGCCAAATGAAGACTAGCGTGACAGAGACTAGTGCATCTGAACTTGCCAAGCTGCTTTATTGGTTGATGGTTGTTGGGTACAGCATTCGCAATATTGAAGTTCGTTATGACATGGAAAGAGTACTTGGCACTCCCCCAAAGCTGGCTGAATTGCCGCCAGGTGAAAATGTTTAA 1185 0.4177 MGVVSFFSGSVTNWYLSICAKSRVNLIPIPQVAEECRCSKANSEISDSGNNYLIMYSLTVKPFLIPYSSSSSTSTSSSSISLASFPSRSLSSICFPRDLKHRGRFGLRVEAYDSFNNDASNPTSAGDSKPPNGTLSKSRREILLEYVKNVQPEFMELFVKRAPQQVVDAMRQTVTNMIGTLPPQFFSVTITTVAENLAQLMYSVMMTGYMFKNAQYRLELQESLEEVVALPDVQDKKDVPDYAPGTQKNVSGEVIRWNNVSGPEKIDAKKYIELLEAEIEELSRQVGRQSSNAQNELLEYLKSLEPRNLKELTSSAGEDVVFAMNTFIKRLLAVSDPSQMKTSVTETSASELAKLLYWLMVVGYSIRNIEVRYDMERVLGTPPKLAELPPGENV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00208 394 Pfam Protein of unknown function (DUF760) 296 379 IPR008479 -
Cca07g00208 394 Pfam Protein of unknown function (DUF760) 143 224 IPR008479 -
Cca07g00208 394 PANTHER OS02G0833400 PROTEIN 55 393 - -
Cca07g00208 394 PANTHER OS02G0833400 PROTEIN 55 393 - -
Cca07g00208 394 Coils Coil 265 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00208 Cca-Chr7 2661336 2669890 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00208 - - gmx:100815202 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00208 07 2661336 2669890 Cca07g00208 07 2661336 2669890 ECH