Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00199 ATGAAGTTTCCAGATATGGTCCATGCTCTTAAACCCAATCCCAAGTCCCACATCCAGGAGAATTGGAGGATCCTTGACTTCTTCTCTCACTTTCCAGAAAGCCTTCACATGTTCACCTTTTTATTTGATGATTTGGGCGTTCCACAAGATTACAGGCACATGGATGGTTTTGGAGTTAACACTTATACCCTGATCAACAAGGCAGGGAAAGCAGTGTATGTGAAATTTCACTGGAAGACCGTGAGTGGTATAAAGTGTCTATTGGAGGAAGAGGCCATTAAGGTAGGAGGATCCAACCACAGCCATGCCACTCAAGACCTTCATGATTCAATTGCTGCTGGTAACTATCCTGAGTGGAAACTGTTCGTTCAGACAATAGATCCTGATCACGAAGACAAATTTGACTTTGACCCTCTTGATGTAACAAAGACTTGGCCTGAGGACATTATACCCTTGCAGCCTGTTGGTCGCTTGGTCTTGAATAAGAACATTGATAATTTCTTTGCTGAGAATGAACAACTTGCATTTTGCCCTGCCATTGTGGTTCCTGGTGTATATTACTCAGATGATAAGATGCTTCAAACCAGGATATTCTCTTATGCTGATTCACAGAGGCACAGACTTGGACCAAACTATCTGCAACTTCCTGCTAATGCTCCCAAGTGTGCTCACCACAACAATCATCATGAAGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTCAATTACTTCCCTTCAAGGTATGATCCTGTTCGTCATGCAGAAAGGTTTCCCACACCTCCTGCTATCTACACCGGAAGGCGTGAAAAGTGTGCAATTGAGAAGGAGAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCTTGGGCACCTGACAGGCAAGATAGATTTATCCGCCGATGGGTTGAGGCTTTATCTGACCCACGTGTCACTCATGAAATCCGCAGTGTTTGGATAACATACTGGTCACAGGCTGATCGTTCTCTAGGCCAAAAGATAGCATCTCATCTGAACTTGAGGCCAAGTATTTAA 1035 0.4415 MKFPDMVHALKPNPKSHIQENWRILDFFSHFPESLHMFTFLFDDLGVPQDYRHMDGFGVNTYTLINKAGKAVYVKFHWKTVSGIKCLLEEEAIKVGGSNHSHATQDLHDSIAAGNYPEWKLFVQTIDPDHEDKFDFDPLDVTKTWPEDIIPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAERFPTPPAIYTGRREKCAIEKENNFKQPGERYRSWAPDRQDRFIRRWVEALSDPRVTHEIRSVWITYWSQADRSLGQKIASHLNLRPSI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00199 344 PANTHER CATALASE 1 344 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca07g00199 344 Pfam Catalase 1 250 IPR011614 GO:0004096|GO:0020037
Cca07g00199 344 Pfam Catalase-related immune-responsive 274 338 IPR010582 -
Cca07g00199 344 PANTHER CATALASE 1 344 - -
Cca07g00199 344 SUPERFAMILY Heme-dependent catalase-like 1 342 IPR020835 GO:0020037
Cca07g00199 344 ProSiteProfiles catalase family profile. 1 344 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca07g00199 344 Gene3D Catalase core domain 1 343 - -
Cca07g00199 344 SMART Catalase_2 1 253 IPR011614 GO:0004096|GO:0020037
Cca07g00199 344 ProSitePatterns Catalase proximal heme-ligand signature. 196 204 IPR002226 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00199 Cca-Chr7 2558175 2561021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00199 K03781 - gmx:547511 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00199 07 2558175 2561021 Cca07g00199 07 2558175 2561021 ECH