Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00191 ATGAAGACGACAATGGAGGAAGAGAAGGAGAAAGTGATACCCCTTCTCACCCCATTCAACATGGCAAAATTTAATCTATCGCATAGGATTGTTCTGGCACCATTAACAAGAACGAGATCATACAACTTCGTGGCACAGCCTCATGCTGCTCTCTATTATTCTCAAAGAACAACCAATGGTGGATTTTTGATTGGAGAAGCCTCTGGGGTATCAGAAACTGCACAAGGGTACCCTAATACTCCTGGCATTTGGAGAAGAGAACAAGTGGAAGCATGGAAACCAATTGTGAAAGCCGTTCATGAGAAAGGTGGAATATTCTTTTGCCAACTTTGGCACGCAGGAAGAGTCTCCCACTATGTTTTCCAGCCAGATGGGCAGGCCCCAATTTCAAGTACAAACAAGCCAATTCAGAAGGAAGGTAGCAGCACTAAGTACCCTTCTCCACGTCGTCTCACAGCAGATGAAATCCCTATGATTGTCAATGACTTCAGAATTGCAGCTAAAAATGCCATAGAAGCTGGTTTTGATGGGGTGGAGATACATGGAGCCAATGGATACTTGCTTGAGCAGTTCCTAAAAGACAAAGTGAATGACAGAGATGATGAGTACGGTGGTAGCTTAGAAAATCGTTGTCGTTTCCCATTGATGGTTGTGAAGGCCGTAGCTGATGAAATTGGGCCTGACAAAGTTGGTGTTAGGCTTTCTCCTTTTGCTGATTATTGTGATTGTGGAGATTCCAACCCTCAAGAGTTGGGCATTTACATGGCCCAATCTTTGAGCAAATTGGGCATTCTCTATTGTCATGTGATTGAGCCCAGGATGCTGACAATGTTCGAAAAGCATGAGACCAATGAATCCTTGTTACCCATTCGAAAGGCCTTTAGTGGAACCTTCATTGTTGCTGGTGGATACAATAGGAGTGAGGGAAACAAAGTGATAGAGAATGGTGGTGCAGATTTGGTGGCTTATGGACGCTTGTTTTTGGCTAATCCTGATTTGCCTAGAAGATTTGAATTGGATGCTGAGTTGAACAAGCCTGATAGAAGCACCTTTTATTCCAATGATCCTGTTGTTGGATACACAGATTATCCATTTCTTGAAAATTTATACCTCAAAGGGCCCAATAAGTTTTAG 1134 0.4303 MKTTMEEEKEKVIPLLTPFNMAKFNLSHRIVLAPLTRTRSYNFVAQPHAALYYSQRTTNGGFLIGEASGVSETAQGYPNTPGIWRREQVEAWKPIVKAVHEKGGIFFCQLWHAGRVSHYVFQPDGQAPISSTNKPIQKEGSSTKYPSPRRLTADEIPMIVNDFRIAAKNAIEAGFDGVEIHGANGYLLEQFLKDKVNDRDDEYGGSLENRCRFPLMVVKAVADEIGPDKVGVRLSPFADYCDCGDSNPQELGIYMAQSLSKLGILYCHVIEPRMLTMFEKHETNESLLPIRKAFSGTFIVAGGYNRSEGNKVIENGGADLVAYGRLFLANPDLPRRFELDAELNKPDRSTFYSNDPVVGYTDYPFLENLYLKGPNKF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00191 377 CDD OYE_like_FMN 14 348 - -
Cca07g00191 377 PANTHER NADH OXIDOREDUCTASE-RELATED 11 368 IPR045247 GO:0010181|GO:0016491
Cca07g00191 377 Gene3D Aldolase class I 2 370 IPR013785 -
Cca07g00191 377 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 11 368 - -
Cca07g00191 377 Pfam NADH:flavin oxidoreductase / NADH oxidase family 15 341 IPR001155 GO:0010181|GO:0016491
Cca07g00191 377 SUPERFAMILY FMN-linked oxidoreductases 14 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00191 Cca-Chr7 2409708 2413314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00191 8 368 Acyl Lipid Metabolism Gene Families AT1G76690 67.213 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00191 K05894 - gmx:100790284 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00191 07 2409708 2413314 Cca07g00191 07 2409708 2413314 ECH