Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00179 ATGAGTCCCCCTTGCAGTTGCGCTTGCGCTTCTAATTCTATAAATTGGAGCGTGGATTATGGAGGTGTAGTGCTTTCGAATTCAAAGCGAAGTAGAAGATGGAGACCAATGGTTTCACTTTCTAATTCGAGAAGGTCGACGGCGCTTCTCATTTCATCCTTGCCTTTCGCCTTCCTTTTCCTCTCTCCGCCAGCGGAAGCCAGACGCAACAAGAAAACCATCCCAATCGAGGAATACGTTACTTCTCCTGATGGATTGCAATACTATGATTTGATCGAGGGCAAAGGTCCGGTGGCTGAGAAAGGAACAACGGTTGAGGTACACTTTGATTGCTTGTATCGCGGAATCACAGCTGTATCCAGTCGAGAATCTAAACTCCTAGCTGGAAATCGTATCATTGCTCAGCCGTATGTATTCACGGTGGGAGCTCCACCGGGAAAGGAAAGGAAGCGTGAATTTGTTGACAACCCGAATGGTTTATTCTCTGCTCAAGCAGCACCGAAACCTCCACCTGCTATGTATACAATAGTGGAAGGAATGCGAGTTGGTGGAAAGCGAACTGTGATTGTTCCTCCTGAAAATGGGTATGGACAAAAGGGAATGAATGAGATTCCGCCTGGAGCTACATTTGAACTAAATGTTGAGCTTCTGCAAGTTGTAGCTACCTGA 669 0.4649 MSPPCSCACASNSINWSVDYGGVVLSNSKRSRRWRPMVSLSNSRRSTALLISSLPFAFLFLSPPAEARRNKKTIPIEEYVTSPDGLQYYDLIEGKGPVAEKGTTVEVHFDCLYRGITAVSSRESKLLAGNRIIAQPYVFTVGAPPGKERKREFVDNPNGLFSAQAAPKPPPAMYTIVEGMRVGGKRTVIVPPENGYGQKGMNEIPPGATFELNVELLQVVAT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00179 222 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 97 217 IPR001179 GO:0003755
Cca07g00179 222 SUPERFAMILY FKBP-like 71 219 - -
Cca07g00179 222 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 30 221 IPR044180 -
Cca07g00179 222 Gene3D - 65 222 IPR046357 GO:0003755
Cca07g00179 222 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 102 220 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00179 Cca-Chr7 2263433 2266115 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00179 K01802 - gmx:100527183 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00179 07 2263433 2266115 Cca07g00179 07 2263433 2266115 ECH