Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00174 ATGGAGGGGCTGGTGGTGGCCATGTCGCTGATTGGGGCGACGGCCATCACCACCTGCTCGGGTCCCATATCGGATTGGCTAGGGCGGAGGCCCATGTTGATAATCTCGTCGCTGCTCTACTTCTTGGGGGGTTTGGTGATGCTGTGGTCCCCTAACGTCTATGTGCTGTGCATAGCGAGGTTGCTTGATGGATTTGGAATTGGGCTTGCGGTTACGCTTGTTCCGGTGTATATATCCGAAACGGCGCCGTCTGAGATAAGGGGGTCGTTGAACACGCTTCCTCAGTTCAGTGGGTCTGGGGGGATGTTCTTCTCCTACTGTATGGTTTTCGGCATGTCCTTGGGCTCCTCGCCTAGCTGGAGGCTCATGCTTGGCCTTCTCTCCATTCCTTCGCTCCTCTATTTTGCGTTGACCGTCTTTTTCTTGCCCGAGTCTCCTCGCTGGCTCGTCAGCAAAGGGAAGATGCTCCAGGCCAAAAAGGTCCTCCAAAGATTGCGGGGAAGGGAGGATGTGTCAGGCGAGATGGCATTGCTGGTGGAAGGTCTCGGGATTGGGGGTGATACATCTATAGAAGAGTACATAATAGGCCCTGCTGACGAGGTGGGTGAAGGTCGGGAACAAGCAACAGATAAAGATAAAATTCGATTGTATGGATCCCAAGCAGGCCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATAGGCCTTGCTTCACGCCATGGAAGCATCATCAACCAAAGCATGCCCCTCATGGATCCTCTGGTGACACTGTTTGGTAGCGTTCATGAGAAGCTCCCTGAGGCAGGAACTGGAAGCATGCGAAGCACTCTGTTTCCAAATTTTGGAAGCATGTTCAGCACAGCTGACCCTCATGTTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGAGAAGGTGAGGACTACATGTCAGATGCTGCTGCTGGGGACTCTGATGATAATTTGCAGAGCCCTTTAATCTCACGTCAAACAACTAGCCTTGAAAAAGACATGCCTCCTCCTCCTTCCCATGGCAGTATCCTGGGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGGTcagctgagcaagttggcagtacaggcattggtggcggctggcagctggcaTGGAAATGGTCTGATAAAGGTGAGGATGGTAAAAAGCAAGCAGGGTTTCAAAGGATTTATTTACATGAGGAGGGAGTTGCTGGATCTCGTCGTGGATCCATTGTATCAATTCCCGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTGGTAAGCCAACCTGCTCTTTACTCTAAGGAGCTTATTGATGGACAACCAGTTGGGCCTGCAATGGTTCACCCATCTGAGACAGCTTCAAAGGGGCCAATTTGGAAAGCTCTTCTTGAGCCAGGGGTTAAGCATGCATTGTTTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACTCCTCAAATCCTTGAAGAGGCCGGTGTTGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCAGCATCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCTTGTATAGGCCTAGCTATGAAGCTCATGGATGTTTCAGGCAGAAGGCAGTTGCTACTTGCTACAATTCCCGTGCTGATTGTGTCTCTCATTATTTTGGTCATTGGAAGCTTAGTAGATTTTGGCAACGTAATCCATGCAGCAATCTCAACAGTATGCGTTGTGGTTTATTTCTGCTGCTTTGTCATGGGTTACGGACCAATTCCAAACATCCTTTGTTCAGAGATTTTCCCCACTAGGGTGCGTGGCATCTGCATTGCGATCTGTGCATTAGTGTTCTGGATTGGAGACATCATTATCACATACTCGCTGCCTGTGATGCTCAGCTCATTAGGACTTGCTGGTGTCTTCGGCATTTATGCCATTGTTTGTTTCATCTCCTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAGTTCTTCTCTGTTGGTGCAAGACAGGCTGCTTCTGCCAAGAATGAGTGA 2088 0.4741 MEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIISSLLYFLGGLVMLWSPNVYVLCIARLLDGFGIGLAVTLVPVYISETAPSEIRGSLNTLPQFSGSGGMFFSYCMVFGMSLGSSPSWRLMLGLLSIPSLLYFALTVFFLPESPRWLVSKGKMLQAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYIIGPADEVGEGREQATDKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMPLMDPLVTLFGSVHEKLPEAGTGSMRSTLFPNFGSMFSTADPHVKNEQWDEESLQREGEDYMSDAAAGDSDDNLQSPLISRQTTSLEKDMPPPPSHGSILGSMRRHSSLMQGSAEQVGSTGIGGGWQLAWKWSDKGEDGKKQAGFQRIYLHEEGVAGSRRGSIVSIPGEGEFVQAAALVSQPALYSKELIDGQPVGPAMVHPSETASKGPIWKALLEPGVKHALFVGVGIQILQQFSGINGVLYYTPQILEEAGVEVLLSDIGIGSESASFLISAFTTFLMLPCIGLAMKLMDVSGRRQLLLATIPVLIVSLIILVIGSLVDFGNVIHAAISTVCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIITYSLPVMLSSLGLAGVFGIYAIVCFISWIFVFLKVPETKGMPLEVISEFFSVGARQAASAKNE 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00174 695 ProSitePatterns Sugar transport proteins signature 1. 20 37 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cca07g00174 695 ProSitePatterns Sugar transport proteins signature 2. 62 87 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cca07g00174 695 Gene3D MFS general substrate transporter like domains 1 207 IPR036259 -
Cca07g00174 695 Gene3D MFS general substrate transporter like domains 455 693 IPR036259 -
Cca07g00174 695 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 671 IPR020846 GO:0022857
Cca07g00174 695 CDD MFS_GLUT_like 472 669 - -
Cca07g00174 695 Pfam Sugar (and other) transporter 460 682 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca07g00174 695 Pfam Sugar (and other) transporter 3 177 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca07g00174 695 PRINTS Sugar transporter signature 484 494 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca07g00174 695 PRINTS Sugar transporter signature 57 76 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca07g00174 695 PRINTS Sugar transporter signature 606 618 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca07g00174 695 PRINTS Sugar transporter signature 583 604 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca07g00174 695 SUPERFAMILY MFS general substrate transporter 3 676 IPR036259 -
Cca07g00174 695 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 1 692 - -
Cca07g00174 695 PANTHER - 1 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00174 Cca-Chr7 2227808 2232301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00174 1 695 Organic Solute Cotransporters AT4G35300 71.124 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00174 - - gmx:100791976 1267.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00174 07 2227808 2232301 Cca07g00174 07 2227808 2232301 ECH