Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00167 ATGGCGTCCATTTGTTGTGTGCATATGCGAATGCGACCAACACTTTGCAACTTCACAGCCTCTAAGGCCGACAAAGGTCCCCCACCTCCCATAACCTTCCATTTGGAGCATCATAAAACAACACCATGTTCACTTTCTTCCATCCAAGAAGGACGCGCGGTTAATAGGAGACAACTTTTTCTTCACGCCGCAGTAGCAGTAGCTGCATTTGCAGTCCCACCTACTGTCTCAAATTCATTGGCACTCAATGATGTGCCTGAGGATGTTCGTATCTACACTGACGATGAGAACAAGTTCAAGATTGAGATTCCCCAAGAGTGGCAAGTAGGAACAGGAGAATCTAATGGCTTGAAATCGGTAACTGCTTTCTACCCAACAGATGCGTCCAATTCCAATGTGAGCGTTGTGATCACAGGGCTGGGACCGGATTTCACTAGGATGGAATCCTTTGGCAAAGTTGACGAGTTTGCTCAGACTCTAGTTAGTGGGCTTGACAGAAGCTGGCAAAGACCCCCAGGTGTGGCTGCTAAACTCATAGATTGTAAATCATCTAAAGGGATTTATTACATCGAGTATTCGCTGCAAAATCCTGGAGAGAGTCGTAGATATTTATATTCAGCTATTGGGATGGCATCAAATGGTTGGTATAATAGGCTATATACGGTGACAGGACAGTTTTTGGAAGAGGAAACGGACAAGTATGCTTCACAAATTCAGAAGGTAGTTGCATCATTTAAGTTCATATGA 747 0.4444 MASICCVHMRMRPTLCNFTASKADKGPPPPITFHLEHHKTTPCSLSSIQEGRAVNRRQLFLHAAVAVAAFAVPPTVSNSLALNDVPEDVRIYTDDENKFKIEIPQEWQVGTGESNGLKSVTAFYPTDASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWQRPPGVAAKLIDCKSSKGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQFLEEETDKYASQIQKVVASFKFI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00167 248 Pfam PsbP 89 247 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Cca07g00167 248 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 82 247 - -
Cca07g00167 248 PANTHER - 37 248 - -
Cca07g00167 248 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 37 248 - -
Cca07g00167 248 SUPERFAMILY Mog1p/PsbP-like 90 247 IPR016123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00167 - - gmx:100785276 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00167 07 2124869 2127350 Cca07g00167 07 2124869 2127350 ECH