Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00159 ATGGAAGCGTTGATTGAGTTGTGCGACCTCATCGCGCAGAACCCGTCGCAATTCTCCGCCAAGCTCTCTTGGATATGCGACAAATGCCCCCCGCCGGAGTACCTCTCCTCGGGATCTCCTAGGGTTTCGCGCTCCCAGCTCAATGCCGTCCTCGCCGTCGCCCGCTTCCTCTCCAACTGCCCCGATTCCGCCGATCTGCGCCCCAAGTCCGTCGTCATCGAGTTCCTCCGCTTCGTTCCCCGTTCCTTCACTCAATCCTTCTGGCCTCACCCTTTCAGCGCCGATTCCGTCGCCTCTTTCTTCCTCGATTTCATCGCCTACGTCTCCAAGGCAGCGGATTCCTCGCCGGATTTGTCCGAGGAGCTCGAAGCCTTCTTCGGCGAAGTAGTCATAACGGCGATTGGCGAACCGCGCTCCGGCATTGCTAGGGCTTTCTTGTCCGCTCTGTCGCACAACTTTCTTCCAATTACGCCCTCTGATGCCAACAGATTGGTCACCTGTTTAATCGACCAATTCGCGGCGCCGAAGGAACTCGCTGCGGAAAATTCATCGTCGCAGAGCTCGCCCCAAAACAATAACAATGGCAGTCCCGGGAATGACAATGTTTCGGGTTCTTCGAGCAGTGCGGCTTCTAAGACTGCGGATGATGCTAGCACTGCGTCATCGCGGGGGATGGTGAATGGGGGAAACCATGTTTGGAGGACCAGTGCTGATCAATTGGCGCAGAATTTGGGTTTAAACGATGGTGCTCTTGGCACGGTTTCGTCTGGGCAGCAAGTTGTTGTGTTCGAGGAAGAGTCTGTGGAGTTTTTGGAGAGGCAGGAAATAGCTTTTAAGTTGATTGCTCATGTGTTGGAGAAGCTCCAAGTCGACACTGCACTTTTGGAGCAGGTTAGGTTAATTGGAAAGAAGCAGATACAGTCCATGTCTGTTTTTCTGAAGATAAGGAAGAGGGATTGGCATGAGCAGGGGTCACTTCTGAAAGCTAGGATTAATACCAAACTTTCAGTTTATAAAGCTGCGGTGAACCTGAAAATCAAGAGCCTCTCAGCGCTGGATTCTGATTCGAGGTCTGTTAAGAGATTGGTTTATGAGGCAGTTGCGATATTGATAGATGCTGCCGAAGCATGCTTACTCTCTGGATGGCGTAAGTTGAGATCGTGTGAAGAGCTCTTCAATTCATTGCTTCTTGGGGTAGCCAAAGTTGCAAATGCCCGAGGAGGACAGCCGCTGCGCATCTTGCTCATTCGCCTAAAGCCAATTGTTCTCAACGTTTGTGCTCAGCCTGATACATGGAGTAACAACCAGGCAGCCATGTTTGAGAGTGTCACAAAGGCCAGCTGTCAGATTATTGAATCCTGCTGGACTAAGGAGCGGGCTCCTGTGGACACATACATAATGGGATTAGCCACAAGCATACGTGAACGAAATGATTATGGAGAACAGGACAACCAAGAGAAACCTGCAGTTCCTTTTGTACAGCTTAATGTTATACGCCTGTTTGCTAAGCTGAGTGTTGCAGTCAACAAGTCTGAGCTGGTAGACGTGATATTACCACTTTTTATTGAAAGCCTAGAAGAGGGTGATGCTTCAACTCCTAGTTTGTTGAGACTCCGACTTCTTGATGCTGTGTCTCAAATGGCCAGTTTAGGATTTGAGAAATCTTACCGTGAAACAGTGGTTTTGATGACTAGAAGTTACTTGAACAAACTTTCCAGTGTAGGATCAGCTGAAAGCAAAACAGAGGCAGCTGAAGCAACAACTGAACGAGTTGAAACTCTACCTGCAGGATTTCTTCATATTGCTAGTGGTCTTACTGGTGATAAATTGCGTTCAGATTTTCGTCATCGATTGCTCTCTCTGTGCTCAGATGTTGGTTTAGCTGCTGAGTCTAAAAGTGGAAGGAGTGGAGCAGATTTCCTGGGTCCACTGCTCCCTGCAGTTGCTGCAGTTTGTTCTGATTTTGATCCTACCGTAAATGTGGAGCCATCACTTTTAAAACAATTTCGCAACCTTTGGTTCTATATTGCTCTTTTTGGCCTGGCACCACCAATACAGAAGACTCCAGTAACTACAAAGTCAGTTTCCACTACACTGAACAGTGTGGGAAGCAATGGTGCAATTTCCCTTCAAGCCGTAAATGGACCATATATGTGGAATGCAGAGTGGTCTTCTGCTGTTCAACGAATTGCCCAGGGGACTCCTCCACTAGTTGTTAGCTCAGTGAAATGGCTTGAGGATGAGTTAGAACTAAATGCTTTGCACAACCCAGGCAGTCGCCGAGGCAGTGGCAATGAGAAAGCTGCTCTTGCACAAAGAACTGCTCTTTCTGCAGCTTTAGGAGGGAGAGTTGATGTCACAGCAATGACCACAATCTCAGGAGTGAAGGCTACTTATCTTCTTGCTGTAGCTTTTCTTGAGATCATCCGCTTCAGCAGCAATGGCGGCATCCTAAATGGTGGCACCATTATTGATGCTACAAGAAGTGCCTTTACTTGTGTCTTTGAATATCTTAAGACTCCAAATTTAATGCCAGCTGTCTTCCAGTGTTTAACAGCAATTGTCCACAGGGCTTTTGAAACAGCTGTGTCGTGGCTGGAAGATCGAGTGTCTGAAATAGGCCATGAAGCTGAGGCACGAGATTCAATACTTACAATGCATACCTGTTTTCTTATAAAAAGTCTCTCCCAGAGGGAAGATCATATACGAGATATTGCAGAGAACTTATTGACTCAATTTAGAGATAAATTTCCACAGGTTTTATGGGATTCTTCCTGCATAGATTCTTTCCTGTTTTCATTTAATGATGACTCTTCTACTACCATCATCAATGATCCTGCTTGGACAGCAACAATCCGTACCTTGTATCAGAGAATTGTTCGAGAATGGATAATTAAATCAGTTTCAAGTGCTCCATGCACTAGCCAGGGCCTTCTACAGGATAAACTATGTAAAGCAAATACTTGGCAAAGAGCACAGCCCACAATTGATGTTGTTTTACTTTTATCCGAGATAAAAATTGGCACTGGGAAAAATGACAATTGGCCAATACAAACAGCAAATATTCCTGCAGTCATGGCTGCAGCAGCTGCAGCTTCAGGGGCAAACTTAAAAGCATCGGAGTCTTTTAATTTAGAGGTTATCAGTTCTGGTAAGTGTAACCAAGCTGCAGCAACAGTTAAGTGCAACCATGCTGGAGAAATTGCTGGAATGAGAAGGTTGTATAACAGCATTGGTGGATTTCAGTCCAGTACACCTCCTGGTATTGGACTTGGAGCCGGGCTTCAAAGAATTATATCTGGAGCTTTTCCTCAGCAGCCACAAGCTCAGGATGACTCATTCAACGGAATGTTGCTTAACAAGTTTGTGCGTTTACTTCAACAGTTTGTCAACATAGCAGAGAAAGGTGGGGAAGTGGTCAGGTCTGAATTTCGTGAAACTTGCTCTCAGGCCACTGTGCTGCTTTTATCAAATTTGAGTTCTGGATCCAAATCGAATGTGGAGGGCTTCTCACAACTTCTTCGTCTTCTTTGCTGGTGTCCTGCTTACATTTCCACCCATGATGCAATGGAAACTGGTATTTTTGTATGGACGTGGTTGGTTTCTGCTGCACCTCAGCTTGGAGCTCTTGTTCTTGCTGAGCTTGTTGATGCATGGTTATGGACAATTGACACCAAGCGGGGTCTTTTTGCATCTGAAGCAAGGTATTCTGGACCTGCTGCAAAACTTAAGCCTCACTTGTCCCCTGGGGAGCCTGAATTGCAGCCTGAGATTAATCCTGTTGAGCAGATAATTGCTCATCGACTATGGCTTGGATTTCTCATTGATCGCTTTGAGGCAGTTCGACACCAAAGTGTGGAGCAACTCCTGCTTCTTGGTAGGATGTTGCAGGGGACAACAAAGCTTCCCTGGAATTTTTCGCGCCATCCTGCGGCCACTGGCACTTTTTTCACTCTTATGCTTCTAGGGCTTAAGTACTGCTCTTGCCAGTTTCAGGGCAATCTGCAAAAATTTCAAATGGGGCTTCAGCTGTTGGAAGATCGGATTTATAGGGCCGCTTTGGGTTGGTTTGCTTTTGAGCCTGAATGGTATGACACAAACTATACAAACTTTGCTCAGTGTGAGGCTCAGTCTGTTTCTCTATTTGTTAACTACCTTTCAAATATGAAAGGGGATACCGTCCAATTTGGTTCAAAAGGAAATGGACAAGAAAATGGGAACTCTTTGGCTGATGCGAGTGATCTCTATCATCCTGTTTGGGGTCAAATGGAGAACTATGCTGTAGGAAGAGAAAAACGGAGGCAGCTACTTTTAATGCTATGCCAGCATGAGGCTGATAGGCTTGACGTCTGGGCACAGCCGACTAACACCAAGGAAAGTAGTTCCCGACCCAAGAATAGTGCAGATAAATGGGTAGAATATACTAGGACTGCCTTCTCTGTGGATCCTAGGATTGCTTTATCCTTGGCCTCAAGGTTTCCGGCCAATTCATTTGTAAAAACTGAAGTAACTCAGCTTGTACAGGCAAATATAGTGGATGTGCGCAACATTCCAGAAGCATTACCTTATTTTATCACCCCAAAGGCAGTTGATGATAATTCAGTGCTCTTGCAACAATTGCCTCATTGGGCTCCTTGTTCTATTACGCAAGCTCTAGAGTTCCTCACACCTGCATACAAGGGGCATCCACGGGTCATGGCATATGTTCTAAGGGTTCTGGAATCCTATCCTCCTGAACGGGTGACCTTTTTCATGCCACAGCTGGTGCAGTCCTTGCGACATGACGAAGGGAAATTAGTTGAAGGTTATTTGCTTAGAGCTGCTCAAAGAAGTGACATATTTGCTCATATTCTTATCTGGCATTTGCAGGGTGAGGATGTACCTGAGCCAGGAAAAGATCCAAACAGTGGGAAGAATGGTTCATTTTTAGAACTGCTGCCAGCTGTTAGGCAGCGTATAATTGATGGATTTAATCCGAAGGCCCTTGACATATTTAAAAGAGAATTTGATTTCTTTGACAAAGTTACATCCATCTCTGGTGTACTATTTCCACTCCCTAAAGAAGAGCGTCGAGCTGGTATCCGAAGGGAGTTGGAGAAAATTGAACTGGATGGCGAGGACCTTTATCTACCAACAGCTCCTGGCAAACTTGTTAAGGGTATTCGAGTAGATAGTGGTATTCCCTTACAATCAGCTGCAAAAGTCCCAATCATGATAACTTTTAATGTAGCTGATCGAGATGGGGACCAAAATGATATAAAGCCACAAGCTTGCATTTTCAAGGTTGGAGATGACTGTAGACAAGATGTTCTTGCCCTTCAAGTAATAGCACTATTAAGAGATATATTTGAAGCTGTGGGAATAAATCTTTATCTATTTCCTTATGGTGTTCTGCCTACTGGTCCTGAGAGAGGTATAATAGAGGTTGTGCCAAATACACGAAGTAGAAGTCAGATGGGGGAAACGACCGATGGAGGTTTGTTTGAGATATTTCAGCAAGACTATGGACCTGTTGGGTCCAACAGTTTTGAGGCTGCTCGCCAGAACTTTATAGTTAGCAGTGCTGGTTATGCCGTTGCTAGTCTTTTACTTCAACCAAAGGATAGGCACAATGGGAACCTTCTCTTTGATAATGTTGGGAGGCTTGTTCATATTGACTTCGGTTTCATCCTAGAAACTTCTCCGGGTGGGAATATGCGTTTTGAAAGTGCTCATTTTAAGCTGAGCCATGAAATGACACAATTACTAGATCCATCTGGTGTTATGAAGAGTGAAACATGGAACCAATTTTTAAGTTTGTGTGTGAAAGGGTACCTTGCTGCCCGTCGACGAATGGATGGGATCATCACTACAGTGGCATTAATGCTAGACAGCGGGTTACCTTGCTTCAGCAGAGGTGACCCGATTGGCAATCTTCGGAAGAGATTTCATCCGGAGATGAGTGAGCGTGAAGCAGCCAATTTCATGACCCATGTTTGTAAAGATGCTTATAACAAGTGGACCACTGCTGGCTATGACTTGATACAGTACCTGCAGCAAGGCATCGAGAAGTGA 6054 0.4551 MEALIELCDLIAQNPSQFSAKLSWICDKCPPPEYLSSGSPRVSRSQLNAVLAVARFLSNCPDSADLRPKSVVIEFLRFVPRSFTQSFWPHPFSADSVASFFLDFIAYVSKAADSSPDLSEELEAFFGEVVITAIGEPRSGIARAFLSALSHNFLPITPSDANRLVTCLIDQFAAPKELAAENSSSQSSPQNNNNGSPGNDNVSGSSSSAASKTADDASTASSRGMVNGGNHVWRTSADQLAQNLGLNDGALGTVSSGQQVVVFEEESVEFLERQEIAFKLIAHVLEKLQVDTALLEQVRLIGKKQIQSMSVFLKIRKRDWHEQGSLLKARINTKLSVYKAAVNLKIKSLSALDSDSRSVKRLVYEAVAILIDAAEACLLSGWRKLRSCEELFNSLLLGVAKVANARGGQPLRILLIRLKPIVLNVCAQPDTWSNNQAAMFESVTKASCQIIESCWTKERAPVDTYIMGLATSIRERNDYGEQDNQEKPAVPFVQLNVIRLFAKLSVAVNKSELVDVILPLFIESLEEGDASTPSLLRLRLLDAVSQMASLGFEKSYRETVVLMTRSYLNKLSSVGSAESKTEAAEATTERVETLPAGFLHIASGLTGDKLRSDFRHRLLSLCSDVGLAAESKSGRSGADFLGPLLPAVAAVCSDFDPTVNVEPSLLKQFRNLWFYIALFGLAPPIQKTPVTTKSVSTTLNSVGSNGAISLQAVNGPYMWNAEWSSAVQRIAQGTPPLVVSSVKWLEDELELNALHNPGSRRGSGNEKAALAQRTALSAALGGRVDVTAMTTISGVKATYLLAVAFLEIIRFSSNGGILNGGTIIDATRSAFTCVFEYLKTPNLMPAVFQCLTAIVHRAFETAVSWLEDRVSEIGHEAEARDSILTMHTCFLIKSLSQREDHIRDIAENLLTQFRDKFPQVLWDSSCIDSFLFSFNDDSSTTIINDPAWTATIRTLYQRIVREWIIKSVSSAPCTSQGLLQDKLCKANTWQRAQPTIDVVLLLSEIKIGTGKNDNWPIQTANIPAVMAAAAAASGANLKASESFNLEVISSGKCNQAAATVKCNHAGEIAGMRRLYNSIGGFQSSTPPGIGLGAGLQRIISGAFPQQPQAQDDSFNGMLLNKFVRLLQQFVNIAEKGGEVVRSEFRETCSQATVLLLSNLSSGSKSNVEGFSQLLRLLCWCPAYISTHDAMETGIFVWTWLVSAAPQLGALVLAELVDAWLWTIDTKRGLFASEARYSGPAAKLKPHLSPGEPELQPEINPVEQIIAHRLWLGFLIDRFEAVRHQSVEQLLLLGRMLQGTTKLPWNFSRHPAATGTFFTLMLLGLKYCSCQFQGNLQKFQMGLQLLEDRIYRAALGWFAFEPEWYDTNYTNFAQCEAQSVSLFVNYLSNMKGDTVQFGSKGNGQENGNSLADASDLYHPVWGQMENYAVGREKRRQLLLMLCQHEADRLDVWAQPTNTKESSSRPKNSADKWVEYTRTAFSVDPRIALSLASRFPANSFVKTEVTQLVQANIVDVRNIPEALPYFITPKAVDDNSVLLQQLPHWAPCSITQALEFLTPAYKGHPRVMAYVLRVLESYPPERVTFFMPQLVQSLRHDEGKLVEGYLLRAAQRSDIFAHILIWHLQGEDVPEPGKDPNSGKNGSFLELLPAVRQRIIDGFNPKALDIFKREFDFFDKVTSISGVLFPLPKEERRAGIRRELEKIELDGEDLYLPTAPGKLVKGIRVDSGIPLQSAAKVPIMITFNVADRDGDQNDIKPQACIFKVGDDCRQDVLALQVIALLRDIFEAVGINLYLFPYGVLPTGPERGIIEVVPNTRSRSQMGETTDGGLFEIFQQDYGPVGSNSFEAARQNFIVSSAGYAVASLLLQPKDRHNGNLLFDNVGRLVHIDFGFILETSPGGNMRFESAHFKLSHEMTQLLDPSGVMKSETWNQFLSLCVKGYLAARRRMDGIITTVALMLDSGLPCFSRGDPIGNLRKRFHPEMSEREAANFMTHVCKDAYNKWTTAGYDLIQYLQQGIEK 2017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00159 2017 Gene3D - 1661 1809 - -
Cca07g00159 2017 SUPERFAMILY ARM repeat 342 929 IPR016024 -
Cca07g00159 2017 Gene3D - 1810 2005 IPR036940 GO:0016301
Cca07g00159 2017 SMART pi3k_hr2_4 1474 1667 IPR001263 -
Cca07g00159 2017 Pfam Phosphoinositide 3-kinase family, accessory domain (PIK domain) 1499 1625 IPR001263 -
Cca07g00159 2017 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 1760 1774 IPR018936 GO:0016301
Cca07g00159 2017 ProSiteProfiles PIK helical domain profile. 1472 1649 IPR001263 -
Cca07g00159 2017 PANTHER BNAA06G03180D PROTEIN 1 2016 - -
Cca07g00159 2017 SUPERFAMILY ARM repeat 1466 1625 IPR016024 -
Cca07g00159 2017 Gene3D - 1452 1630 IPR042236 -
Cca07g00159 2017 Pfam PI4-kinase N-terminal region 278 1459 IPR045495 -
Cca07g00159 2017 MobiDBLite consensus disorder prediction 179 228 - -
Cca07g00159 2017 CDD PI4Kc_III_alpha 1717 2016 - -
Cca07g00159 2017 SMART pi3k_hr1_6 1757 2014 IPR000403 -
Cca07g00159 2017 PANTHER PHOSPHATIDYLINOSITOL KINASE 1 2016 IPR015433 GO:0046854|GO:0048015
Cca07g00159 2017 SUPERFAMILY Protein kinase-like (PK-like) 1661 2010 IPR011009 -
Cca07g00159 2017 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1723 2001 IPR000403 -
Cca07g00159 2017 Pfam Phosphatidylinositol 3- and 4-kinase 1757 1816 IPR000403 -
Cca07g00159 2017 Pfam Phosphatidylinositol 3- and 4-kinase 1817 1964 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00159 Cca-Chr7 2009972 2028316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00159 1 2017 Acyl Lipid Metabolism Gene Families AT1G49340 73.751 0.0 3028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00159 K00888 - gmx:100777069 3609.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00159 07 2009972 2028316 Cca07g00159 07 2009972 2028316 ECH