Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00155 ATGAGACTTGGATTTGCTTCTGGGAGCTTCATCCTATGCTCCTTACTTGTCTTTTTGATTCTACAAGACAGTGGAGCTAGAAAGATAGCTACAACATCTGAGATAGACATTCATTTGAAGGAAATATCCTATGACTTGCAAAAGCTTGCTACAGTGAGTCTTGTACTTGACAATATTATTCAGCTTGAAGGCTCTGGTATAGAAAAGAATAAGAGGCATGTCCATAAAgatgatgatgaggatgatgatgatgatgatgatgaagaagaagaagaagaagaagaagaagacaacgaaaaagatgatgatgatgatgaggaggagggggatgatgatgaacacagaaAGATCACTGGAAAGGATGTGCATGCTTATAAGCCATCCCATGTGGATCACAATCACATGGACCTTGAACTGAATGTGTTTTTCACCCCAAAAGATTTAAAGGTTGGGAAAATAATGCCAATCTATTTCTCCAAGAAGAATTCTTCAACATCTCCAAAATTTCTGACCAGAGAAGAAGCTGACAAGATTCCTTTCTCATCAAAACACCTACCATCCCTTCTCAAATTCTTCTCCATGTCAAAACACTCTCCCCAAGCCAAGGCCATGAAGTACACACTCAAACAATGTGAATTTGAATCCATGGAAGGAGAGACCAAGTTCTGTGCCACTTCCTTGGAGTCCTTGTTTGACTTTGCACACTACCTGTTTGGTTCAAATGCACAGTTCAAAGTTCTGACCACTGTCCATCTCACAAGCTCCATACCCCTTTTACAAAACTACACAGTCTCAGAAGTGAAAGTGATTTCAGCTACAAACGTGATAGGGTGTCACCCAATGCCTTACCCCTATGCAGTTTTTTACTGCCACAGCCAGCACAGTGACACCAATCTCTATGAAGTCTTGGTAGAAGGTGAGAATGGAGGGAGTGTTCAAGCTGCAGCTATTTGCCACATGGACACCTCTAAGTGGGACCCAGACCACGTGTCCTTTCGTGTGCTCAATGTTGAGCCAGGAACCTCCCCTGTGTGTCATTTCTTCCCTTCTGATAATCTAGTCTGGGTGCCTCTCCATAACTAG 1083 0.3804 MRLGFASGSFILCSLLVFLILQDSGARKIATTSEIDIHLKEISYDLQKLATVSLVLDNIIQLEGSGIEKNKRHVHKDDDEDDDDDDDEEEEEEEEEDNEKDDDDDEEEGDDDEHRKITGKDVHAYKPSHVDHNHMDLELNVFFTPKDLKVGKIMPIYFSKKNSSTSPKFLTREEADKIPFSSKHLPSLLKFFSMSKHSPQAKAMKYTLKQCEFESMEGETKFCATSLESLFDFAHYLFGSNAQFKVLTTVHLTSSIPLLQNYTVSEVKVISATNVIGCHPMPYPYAVFYCHSQHSDTNLYEVLVEGENGGSVQAAAICHMDTSKWDPDHVSFRVLNVEPGTSPVCHFFPSDNLVWVPLHN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00155 360 MobiDBLite consensus disorder prediction 71 127 - -
Cca07g00155 360 PANTHER DEHYDRATION-RESPONSIVE RD22-LIKE PROTEIN 5 358 - -
Cca07g00155 360 MobiDBLite consensus disorder prediction 112 127 - -
Cca07g00155 360 SMART BURP_2 140 358 IPR004873 -
Cca07g00155 360 Pfam BURP domain 141 357 IPR004873 -
Cca07g00155 360 MobiDBLite consensus disorder prediction 79 111 - -
Cca07g00155 360 ProSiteProfiles BURP domain profile. 142 358 IPR004873 -
Cca07g00155 360 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 5 358 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00155 Cca-Chr7 1946294 1948076 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00155 - - gmx:100806829 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00155 07 1946294 1948076 Cca07g00155 07 1946294 1948076 ECH