Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00151 ATGCAATTAAGCAGAAATATGGGCATAAATTTGAACCTTTTCATTTACCTAGTACTCATCCTGTGTTCTTATGGAGGCCAAGCCAGGGAGTTGGCTGGAACAGAAAACAAACCCTTGGAAATTTCACTTGAAGATGGCCTCACTGAAACACATGCCATGGATCACTCAAATAAGCTGGGCCATAGTAGCCACTCGCATGCTCATTTTACTAGCATGGACCATTTAGACCCTTCACTAATGGTGTTCTTCACTTTGAAAGACTTAAAGGTAGGGAAAAGAATGGCCATTCATTTTCCAAAGAGAGATCCAGCAAACTCCCCCAAGCTGTGGCCAAGGGAAGAAGCTGATGCAGTTCCTTTCTCATCTAACCAACTACCATACCTTCTCAAACTCTTCTCTTTCTCTCCACACTCTTCCCAAGCCACAGCCATGGAAAACACCCTAAAGGAATGTGAGAGCAAACCCATCAAAGGAGAGGTGAAGTTCTGTGCCACCTCTCTAGAGTCCATGCTTGACTTTACACATAGCATTCTAGGGTTGACATCTGAACCCCAAGTTTTTGCCACTTTGCACCAAACAAAGTCAAGTGTGACTTTCCAAAATTACACAATCCTAGAAACCCTGATGGAAATCCCTGCTCCCAAGATGGTGGCTTGTCACACCATGCCTTACCCTTATGCTGTTTTCTATTGCCATAGCCAAGAAAGTGGGAATAGGGTATATAGGGTGTCACTAGTTGGTGAGAATGGGGATAGGGTTGATGCTATGGTTGTTTGTCACTTGGATACATCACAATGGGCACCAACTCATGTTTCATTCCAAGTGCTTAAGATTAGTCCAGGAACCTCTCCTGTGTGCCACTTCTTCCCTGCGGATCATCTCATCTGGGTCCCCAAACTGCATGCACAGGGTTCTTCAAGCATGTGA 927 0.4477 MQLSRNMGINLNLFIYLVLILCSYGGQARELAGTENKPLEISLEDGLTETHAMDHSNKLGHSSHSHAHFTSMDHLDPSLMVFFTLKDLKVGKRMAIHFPKRDPANSPKLWPREEADAVPFSSNQLPYLLKLFSFSPHSSQATAMENTLKECESKPIKGEVKFCATSLESMLDFTHSILGLTSEPQVFATLHQTKSSVTFQNYTILETLMEIPAPKMVACHTMPYPYAVFYCHSQESGNRVYRVSLVGENGDRVDAMVVCHLDTSQWAPTHVSFQVLKISPGTSPVCHFFPADHLIWVPKLHAQGSSSM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00151 308 ProSiteProfiles BURP domain profile. 82 299 IPR004873 -
Cca07g00151 308 SMART BURP_2 80 299 IPR004873 -
Cca07g00151 308 PANTHER BURP DOMAIN PROTEIN USPL1 15 299 - -
Cca07g00151 308 Pfam BURP domain 81 298 IPR004873 -
Cca07g00151 308 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 15 299 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00151 Cca-Chr7 1892004 1893464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00151 - - pvu:PHAVU_009G024400g 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00151 07 1892004 1893464 Cca07g00151 07 1892004 1893464 ECH