Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00140 ATGCCGGATTTTCAGCAGAGCGTGAAGCTAAAGTATGTGAAACTAGGATACCATTACCTCATGTCACACATCTTCACTCTCTGCCTGTTACCTCTCATGTCCGTAATCCTCCTCCAAGCCTCCCAGATGAAAGCAGAGGACATTCACCACCTCTGGGCCCACCTCCAGTACAACCTAATCACCGTCCTCGCTTTCTGCGCCATCCTAGTTTTCGGATCCACCCTTTTCATCATCACCCGATCCAAATCCGTCTACCTCATCGACTACTCCTGCCACCGTCCCCCTCCCCACCTCCGCGTCCGCTTCCACCAATTCATGGACCACTCCACCCTCACCGGAGATTTCCTCCCCTCCTCCCTCGACTTCCAGCGCAAGATCCTCCTCCGCTCCGGCCTCGGCCAGGACACCTACCTCCCCGCCTCCGTCCACGCCATCCCCCCCAACCCCTCCCTGGCCGCCGCCCGGGAGGAGGCCGAGCAGGTCATGTTCTCCGCCCTCGACAACCTCTTCGCCAACACCCACGTCAAACCCAAACACATCGGCATCCTCGTCGTGAACTGCAGCCTCTTCAACCCCACCCCTTCCCTCTCCGCCATGATCGTCAACCGCTACAAGCTCCGCGGCAACGTCAAAAGCTTCAACCTTGGCGGCATGGGCTGCAGCGCCAGCCTCATCGCCCTCGATCTCGCCAAGGACTTGCTTCAGGTCCACCGCAACACCTACGCACTCATCCTCAGCACCGAGAACATCACGCAGAATTGGTACTTCGGCAACAACAAGGCCATGCTCATCCCCAATTGCCTCTTCCGCCTCGGCGGCGCCGCCATACTCCTCTCCAACAAACCCTCCGACCGATCACGCGCCAAGTATAAGCTCCTCCACGTTGTTAGAAGCCACAAAGGGGCCGATGACAAGGCCTTCCGCTGTGTCTACCAGGAACAGGATGATGTGGGGAAAACCGGTGTTTCTTTGTCGAAGGATCTCATGGCAATTGCTGGGGCTGCTCTCAAGACTAACATTACCACTTTGGGTCCCCTTGTGTTGCCCCTCAGCGAGCAGCTTCTTTTCTTTTTCACCCTCTTTCTTAAGAAGCTTTTTAATTCCAAGATGAACCCTTATATTCCCGATTTCAAACTCGCCTTTCATCATTTCTGTATCCACGCTGGGGGGAGGGCCGTGATTGATGAGCTGGAGAAGAATCTTCAGCTTCTGCCGGAACACGTCGAGGCTTCTAGAATGACGCTGCATAGATTTGGAAACACTTCTTCCAGTTCGATTTGGTATGAGCTGGCTTACACGGAGGCCAAGGGCAGAATGAGAAAGGGGCACAGAGTGTGGCAGATTGCGTTTGGGAGTGGATTCAAGTGTAACAGTGCGGTGTGGAAGGCACTTACACATGTTACCCCCTCTCCCAATACTCCTTGGGAAGATTGCATTCATAACTATCCCGTTCAGATTGTTGCATAG 1467 0.5481 MPDFQQSVKLKYVKLGYHYLMSHIFTLCLLPLMSVILLQASQMKAEDIHHLWAHLQYNLITVLAFCAILVFGSTLFIITRSKSVYLIDYSCHRPPPHLRVRFHQFMDHSTLTGDFLPSSLDFQRKILLRSGLGQDTYLPASVHAIPPNPSLAAAREEAEQVMFSALDNLFANTHVKPKHIGILVVNCSLFNPTPSLSAMIVNRYKLRGNVKSFNLGGMGCSASLIALDLAKDLLQVHRNTYALILSTENITQNWYFGNNKAMLIPNCLFRLGGAAILLSNKPSDRSRAKYKLLHVVRSHKGADDKAFRCVYQEQDDVGKTGVSLSKDLMAIAGAALKTNITTLGPLVLPLSEQLLFFFTLFLKKLFNSKMNPYIPDFKLAFHHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGHRVWQIAFGSGFKCNSAVWKALTHVTPSPNTPWEDCIHNYPVQIVA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00140 488 PANTHER 3-KETOACYL-COA SYNTHASE 2 487 IPR012392 GO:0006633|GO:0016020|GO:0016747
Cca07g00140 488 SUPERFAMILY Thiolase-like 70 287 IPR016039 GO:0016746
Cca07g00140 488 CDD CHS_like 67 461 - -
Cca07g00140 488 Gene3D - 123 463 IPR016039 GO:0016746
Cca07g00140 488 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 382 462 IPR013747 -
Cca07g00140 488 PANTHER 3-KETOACYL-COA SYNTHASE 4 2 487 - -
Cca07g00140 488 PIRSF Very_long_ch_3-ktacl-CoA_syn 3 488 IPR012392 GO:0006633|GO:0016020|GO:0016747
Cca07g00140 488 SUPERFAMILY Thiolase-like 293 462 IPR016039 GO:0016746
Cca07g00140 488 Pfam FAE1/Type III polyketide synthase-like protein 78 364 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00140 Cca-Chr7 1705657 1707615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00140 1 486 Miscellaneous Gene Families AT1G19440 75.309 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00140 K15397 - zju:107403629 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00140 07 1705657 1707615 Cca07g00140 07 1705657 1707615 ECH