Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00135 ATGGAGGGAAGTGGAGGTGGCGCTGCTTCTTCGTCTCCACCTGTGGCTAAATATTTAAACGACTTCTCCAAGCTGTTTCAATACTATCTCGATAAATCTACTCCCCATTCTGTGTACCGATGGATTGGGACTTTGGTCATTGCAATCATCTACGTTTTGCGAACTTTTTATGTGCAGGGATTTTACATTGTTTCTTACGGCCTCGGAATCTACCTTCTCAATCTCTTGATCGGTTTTCTCTCCCCGTTGGTTGATCCTGAGCTCGATCCCTCCAACGCCCCTATGCTTCCAACCAAAGGCTCCGATGAGTTCAAACCCTTCATTCGTCGCCTCCCTGAGTTCAAGTTCTGGTATTCCTTCACCAAGGCTCTCTGCATAGCCTTTGTAATGACCTTCTTTTCCGTATTTGATGTTCCTGTCTTTTGGCCCATATTACTCTGTTACTGGTTTGTTCTCTTTGTCCTTACAATGAGGCGCCAAATTGCACACATGATCAAATACAAATATATTCCCTTCAACTTGGGGAAGCAGAAGTATGGCAGTAAGAAATCTTCTGCAGGAGCCTTCTACCTCAATATTCAGGCAAAATTCATCTCTTTCGCTTTCGCTTCAGGTTCAGGTTCAGGTTGA 630 0.4444 MEGSGGGAASSSPPVAKYLNDFSKLFQYYLDKSTPHSVYRWIGTLVIAIIYVLRTFYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPELDPSNAPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSVFDVPVFWPILLCYWFVLFVLTMRRQIAHMIKYKYIPFNLGKQKYGSKKSSAGAFYLNIQAKFISFAFASGSGSG 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00135 209 PIRSF AtER_Rer1p 1 189 IPR004932 GO:0016021
Cca07g00135 209 PANTHER PROTEIN RER1 1 186 IPR004932 GO:0016021
Cca07g00135 209 PANTHER PROTEIN RER1A 1 186 - -
Cca07g00135 209 Pfam Rer1 family 19 180 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00135 Cca-Chr7 1637450 1641222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00135 1 188 Miscellaneous Gene Families AT2G21600 74.468 5.67e-105 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00135 - - gmx:100817031 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00135 07 1637450 1641222 Cca07g00135 07 1637450 1641222 ECH