Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00123 ATGGCAACTGAGCAAGTCCTTCACATGAATGGAGGTGTGGGAGAAACAAGCTATGCAAACAACTCCACATTTCAAAGAAAAGTGATGTTGATCACCAAACACATCCTTGAAGATAGCATAATGAGGCTGTACTGCTCCACTCTTCCAAACTGTTTGAAAGTGGCTGATTTGGGTTGCTCATCAGGTCCAAATGCACTGCTAGTCGCATCTAACGTCATCAACGTTGTTCATCCTTTGAGTCAAACCTTGAATCGTGACCCACCCATGTTTCAGTTTTTCCTCAATGACCTATTTGGAAACGATTTCAATACCATCTTTAAGTCACTTCCCGAATTTTACAAGAGAATGCAAGAAGAGAAGGGAGACAATTTTGGTCCATGTTTCTTTAGTGGAACACCTGGATCATTCTATGGGAGGCTATTTCCCAATGATTCCATTCATTTCTTTCATTCCTCCTATAGTCTACATTGGCTTTCTAAGATTCCAGATGAGTTGACAGAGGGTGCAGAACCAATAAACAAAGGGGCCATTTATCTAACAAGGGCAAGCCCTCCAGCAGTGCACAAAGCATACTTTGCACAGTTTCAAGAAGACTTCAAATTCTTCTTGAGATCACGTTCCAGTGAAATTCTTCCTGGTGGTGCTATGGTCCTAACATTCATTGGCAGAGATGAACACAATGAACTAATAAATGCTTGGGTTGTCATTGGTATGGCACTTAATGACATGGCTGCAGAGAAATTGATAGAGCAGAAAAAATTGGACTCGTTTAACATACCATCATATTGTCCTACGGCTGAGGAGATTAGAGAAATAATTGAGGAAGAAGGGTCTTTTGATATTCAGAGATTGGAAACAATCAGAACGGATTGGGTGAAGAACATCAATGTGAGTGATGATGAGTCTCTTATTGATGAAAAGGCAGTAGCAAAGGACATAAGGGCTGTTGCTGAACCAATTTTGAAGTCAGAGTTTGGGGAAGAAATCATGGATAAATTGTTCTGCAGGTTCAAGAACTATATTGTCCAACTTTATGGTGTGGAGAAATTGGAGCTCCCTAATCTAGTCATGCACATCACCAAGAGTAATTGA 1092 0.4057 MATEQVLHMNGGVGETSYANNSTFQRKVMLITKHILEDSIMRLYCSTLPNCLKVADLGCSSGPNALLVASNVINVVHPLSQTLNRDPPMFQFFLNDLFGNDFNTIFKSLPEFYKRMQEEKGDNFGPCFFSGTPGSFYGRLFPNDSIHFFHSSYSLHWLSKIPDELTEGAEPINKGAIYLTRASPPAVHKAYFAQFQEDFKFFLRSRSSEILPGGAMVLTFIGRDEHNELINAWVVIGMALNDMAAEKLIEQKKLDSFNIPSYCPTAEEIREIIEEEGSFDIQRLETIRTDWVKNINVSDDESLIDEKAVAKDIRAVAEPILKSEFGEEIMDKLFCRFKNYIVQLYGVEKLELPNLVMHITKSN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00123 363 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 4 361 IPR005299 GO:0008168
Cca07g00123 363 Pfam SAM dependent carboxyl methyltransferase 40 359 IPR005299 GO:0008168
Cca07g00123 363 PANTHER 7-METHYLXANTHOSINE SYNTHASE-RELATED 4 361 - -
Cca07g00123 363 Gene3D Vaccinia Virus protein VP39 21 290 IPR029063 -
Cca07g00123 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 361 IPR029063 -
Cca07g00123 363 Gene3D - 6 345 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00123 Cca-Chr7 1544814 1546250 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00123 - K21483 gmx:100819588 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00123 07 1544814 1546250 Cca07g00123 07 1544814 1546250 ECH