Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00122 ATGGCAACAGTACAATTTATCATCGCTAATGGTGGTGCTGGGGAAGCTAGCTACGCAAACAATTCCTCATTTCAAAGTAAGATGATATCAAAAGTGAAACCCATCCTGGAAGATAGTATGAGGAGCCTGTATTGCAACTCTGTCCCAAGCTGTTTCAAAGTGGCTGACTTGGGTTGCTCTTCAGGACCAAATGCACTTCAAGTGGTGCATGATATAATTGATGCTGTTCATAACATAAGTGCCACCTTTAATCTTGAGCCACCCACATTCCAAATTTTCCTCAATGACCAATTTCGAAACGATTTCAACAACATCTTTGAGTCCCTACCTTCCTTCTATGAGAGGCTACGAGAAGAGAAGGGAGAGAAATTTAGTACTTCATGTTTCGTTAATGCAACACCTGGAAGCTTTTATGGGAGACTCTTCCCAACCAATTCCATGCACTTTTTTCATTCTTCCACCAGTCTTCATTGGCTCTCTCAGGCTCCAAAGGGGTTGGCTAAGGGAACAGGATTGGTTAACAAGGGAAACATTTACTTCACAAGCACAAGCCCATCTTCAGTGTACCAAGCATACCTTGAACAGTTTAGTGAAGATTTCAATCTGTTTATAAAATCACGTGCTGAAGAATTAGTGAGTGGTGGTGGTATGATTCTAACATTTGTTGGTAGAGATGAAACTTGTGAAATAATCACTCCTTGGGGACTAATTGGTTTGGTACTCAATGACATGGTTTCGGAGAGTTTGATTGAAGAGGCGAAGTTGGAGTCAGTTAATATGCCAAGATTTGGTCCTACAGCTAAGGAAGTTAAAGAATTGATTGAGGCAGAAGGGTCTTTTACTCTGCAGAAGATGGAGAGTTTCAAGTCACGTTGGGATGAGGGGTTGAAGGAGAATGGTAATGATGTTTTAGATAGAAATGTGAGAGCTAATTTCATAGCCAAATACGTGAGAGCTACTACTGAACCTTTACTGACGGCATGGTTTGGAGAAGGAATAATTCATGAATTGTTCCTTAGATTCAGAAAGAAGGTTGCTGACCTGTTGGAAGAACAGATATTAGAGCATGCTTATCTGGTCATGTTTATGACAAGAAAATGA 1101 0.406 MATVQFIIANGGAGEASYANNSSFQSKMISKVKPILEDSMRSLYCNSVPSCFKVADLGCSSGPNALQVVHDIIDAVHNISATFNLEPPTFQIFLNDQFRNDFNNIFESLPSFYERLREEKGEKFSTSCFVNATPGSFYGRLFPTNSMHFFHSSTSLHWLSQAPKGLAKGTGLVNKGNIYFTSTSPSSVYQAYLEQFSEDFNLFIKSRAEELVSGGGMILTFVGRDETCEIITPWGLIGLVLNDMVSESLIEEAKLESVNMPRFGPTAKEVKELIEAEGSFTLQKMESFKSRWDEGLKENGNDVLDRNVRANFIAKYVRATTEPLLTAWFGEGIIHELFLRFRKKVADLLEEQILEHAYLVMFMTRK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00122 366 PANTHER 7-METHYLXANTHOSINE SYNTHASE-RELATED 9 365 - -
Cca07g00122 366 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 9 365 IPR005299 GO:0008168
Cca07g00122 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 366 IPR029063 -
Cca07g00122 366 Gene3D - 17 346 IPR042086 -
Cca07g00122 366 Pfam SAM dependent carboxyl methyltransferase 40 365 IPR005299 GO:0008168
Cca07g00122 366 Gene3D Vaccinia Virus protein VP39 21 291 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00122 Cca-Chr7 1532842 1534767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00122 - K21483 gmx:100803105 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00122 07 1532842 1534767 Cca07g00122 07 1532842 1534767 ECH