Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00096 ATGGCTTTATGCAAAACTGTTCTTCATTTCTGTTCCAATACTCGTTTCGCTGCTTTACTCCCTTCAACGAGGTCGCATAGTAGCCGCTACTATTCGCACGCCTTGAACTCCAACTTGAAGCGCGCATTCCTCGTCGATACACTTGCGCTGGTAAGGGGGTTAGAAGCAAAAGGAGTCCCGTCCAAACAGGCCGAGGCCATAACTGCTGCCATCACCGAAGTTCTAAATGATAGCTTGGAAAATGTGGCCAATTCTTTTGTTTCAAAATCAGAAATGCAGAAGTCAGAGATGCTCCAAGAAGCGAATCTCTCCAAGTTCAAAACAGAAGTGCAAAGTTCTCAGGAGCATCATTTTTCCCTGTTGCAACGTGAGACTGAAAAGCTTCTTGGTGACATAGAGAAGATGAGAAGTGAATTGAGGTATGAGATTGACAAAGTCACCGCTGGACAACGTCTGGACTTGAATCTTGAGAGAGGCACAGACGCATACGGGATGAACTTGCTAATCAGAGTGCTGAAACCAGCAATTTAA 531 0.452 MALCKTVLHFCSNTRFAALLPSTRSHSSRYYSHALNSNLKRAFLVDTLALVRGLEAKGVPSKQAEAITAAITEVLNDSLENVANSFVSKSEMQKSEMLQEANLSKFKTEVQSSQEHHFSLLQRETEKLLGDIEKMRSELRYEIDKVTAGQRLDLNLERGTDAYGMNLLIRVLKPAI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00096 176 Gene3D - 46 146 - -
Cca07g00096 176 PANTHER FMP32-LIKE PROTEIN 21 159 - -
Cca07g00096 176 PANTHER UNCHARACTERIZED 21 159 IPR024461 -
Cca07g00096 176 Pfam Coiled-coil domain-containing protein 90-like 45 159 IPR024461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00096 Cca-Chr7 1265750 1269058 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00096 - - tcc:18607696 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00096 07 1265750 1269058 Cca07g00096 07 1265750 1269058 ECH