Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00087 ATGGCATCGACGGCAGCGTACCTGGCTCGGCGGGCGGCGCAGAAGGAGAGGGTTCGGATCCTGTACCGCCGCGCCCTCAAAGACACTCTCAACTGGGCCGTACATCGCCACCTCTTCTACGACGACGTATTCTCCTTTCTCTTCTCTCCATTTCAATTTCAATCCCTTCTCTTCTCTAATCCCCTTTTCCCTTTCTCTCCTCAGGCTTCAAATCTCCGCGAAAGGTTCGAGGAAAACAGACACGTCGAAGACCCTGATACCATTGATAGGCTCATAGCGGATGCTGAAGCCTCCTACAACAAGTGGCGTCATCCTGATCCTTATATAGTTCCTTGGGCTCCTGGTGGTTCTAAGTTTACTCGTAACCCAACTCCGCCTCAAGGGATTGAGATAGTTTATAATTATGGCCGGGAAGAGAATGACTGA 426 0.5117 MASTAAYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYDDVFSFLFSPFQFQSLLFSNPLFPFSPQASNLRERFEENRHVEDPDTIDRLIADAEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPQGIEIVYNYGREEND 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00087 141 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT 2 140 IPR033034 GO:0006120
Cca07g00087 141 Pfam Complex 1 protein (LYR family) 70 96 IPR008011 -
Cca07g00087 141 CDD Complex1_LYR_NDUFB9_LYRM3 14 116 IPR045292 -
Cca07g00087 141 PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 9 2 140 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00087 K03965 - gmx:100305723 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00087 07 1181124 1183164 Cca07g00087 07 1181124 1183164 ECH