Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00071 ATGTCTGCGCTTGGAGACCAATCACAGGAAGAACCCATGGCTGCCCAACCCCAACCTCAGGACCGACCCATTTCTAACATCGTCATCGTCATTGCTATGCAAACAGAGGCACTTCCGGTCGTCAATAGGTTCCAGCTCACTGAGGACCCTCAATCTCCGTTTCCACAAGGGGTTCCTTGGGTTCGTTATCATGGGACATACAAAGATCTCAATATAAGCTTGATTTGGCCAGGAAAAGATCCTGCTTTGGGGGTTGATAGTGTAGGCACGATATCATCTGCTCTTGTAACATATGCTGCTATTCAAGCATTACAACCAGACTTGATCATAAATGCAGGCACTGCTGGTGGCTTCAAGGCCAAAGGAGCTAGTGTTGGTGATATTTTCATCATATCAGATTGTGCTTTTCACGACAGAAGAATACCCATACCTGTTTTTGATCTGTATGGAGTTGGTTTACGTAAAGCCTTTGAAACACCCAACCTTGTAAAGGAGCTTAATCTAAAGGTGGCTAAATTGTCTACTGGTGACTCTTTAGACATGACACAGCAGGATGAATCATCAATCATTGCAAATGATGCCACAGTTAAAGATATGGAGGGAGCAGCTATTGCTTATGTTACTGAACTTCTCAAAGTTCCTGCAATTTTTGTAAAAGCCGTGACTGATATCATTGATGGTGACAAACCAACCGCAGAAGAATTCCTGCAGAATTTGGCAGCTGTAACTGCTGCACTTGATCTGGCTGTTGAACAAGTTATTAATTTTATTAATGGAAAGTACGTATCTGAACTTTAA 798 0.4273 MSALGDQSQEEPMAAQPQPQDRPISNIVIVIAMQTEALPVVNRFQLTEDPQSPFPQGVPWVRYHGTYKDLNISLIWPGKDPALGVDSVGTISSALVTYAAIQALQPDLIINAGTAGGFKAKGASVGDIFIISDCAFHDRRIPIPVFDLYGVGLRKAFETPNLVKELNLKVAKLSTGDSLDMTQQDESSIIANDATVKDMEGAAIAYVTELLKVPAIFVKAVTDIIDGDKPTAEEFLQNLAAVTAALDLAVEQVINFINGKYVSEL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00071 265 CDD MTAN 27 245 - -
Cca07g00071 265 Gene3D Nucleoside phosphorylase domain 21 265 IPR035994 GO:0003824|GO:0009116
Cca07g00071 265 MobiDBLite consensus disorder prediction 1 20 - -
Cca07g00071 265 SUPERFAMILY Purine and uridine phosphorylases 27 246 IPR035994 GO:0003824|GO:0009116
Cca07g00071 265 PANTHER 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE 1 20 265 IPR044580 GO:0008930|GO:0019509
Cca07g00071 265 Pfam Phosphorylase superfamily 27 254 IPR000845 GO:0003824|GO:0009116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00071 Cca-Chr7 927194 932035 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00071 K01244 - gmx:100800253 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00071 07 927194 932035 Cca07g00071 07 927194 932035 ECH