Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00069 ATGTCTTCCATTCCGAAAGATCGGTCACACAAGGGAAACTTGAAGAATCCAGAGGCACTAGATAGGCCAAAGGCTTCGAATAAAGAGAGTGTAGCAGAAGTGGAGAGGTCACACAATGGAGATTTGAAGAATCTAGAAGCACCAGAGAGTGTGGCAGAAGTGGGGAAATTTGATTTCTTAAAAGCATTAGAAAGGCCAAGGCCTTTGAATATAGAGAGACAAAGATCGTGTGATGAAAGAACAATGAGTGAACTATCCATAGGCATTTCTCCACGTCAATTGACCGCAAAAGCTGAAAACTGTTCTCGCCTGGGGGACCATCTTGATCATCTAAATTCTCCTCTGCCAAAGTCAGGTCTTAACACTCCCAGATCAGCTACATTTGATTCACATTCAATAGCATCGGAAGCTTGGGATGCTCTAAGGCGTTCCTTGGTATATTTCCGCGGTCAGCCAGTTGGTACAATTGCTGCTTTGGATAATTCTGATGAAAAACTTAATTATGATCAGGTTTTTGTAAGAGACTTTGTCCCAAGTGCTTTGGCTTTTCTAATGAACGGGGAACCAGACATTGTTAAAAATTTTATCTTAAAGACCCTTCGCCTTCAATCATGGGAGAAAAAGATTGACAGGTTCCAGCTGGCAGAAGGGGTGATGCCTGCTAGTTTTAAAGTATTCCATGATCCAGTCAGAAACCATGAAACCCTTATAGCAGATTTTGGTGAAAGTGCAATAGGCAGGGTTGCTCCTGTTGATTCTGGATTTTGGTGGATTATTCTACTTCGTGCATACACAAAGTCTACAGGAGACTCTTCTTTGGCTGAACTACCCGAATGTCAAAAGGGTATGCGCTTGATCCTGAGTTTATGCCTGTCAGAAGGGTTTGACACGTTTCCGACTTTACTATGTGCTGATGGATGCTGCATGATTGATCGTAGAATGGGTGTTTATGGTTATCCAATTGAAATTCAAGCATTGTTCTTCATGGCTTTAAGATATTGGATATTTGATTTCATGCCTCATCATGGTGGATACTTTCTTGGGAATGTGAGCCCTGCTAGGATGGATTTCCGGTGGTTTTGTCTGGGCAATTGCATTGCAATTTTGTCGTGCATGGCAACAACTGAACAGTCAACTGCAATCATGGATCTCATTGAATCACGGTGGGAGGAATTAGTTGGGGATATGCCTGTCAAAGTTTGTTATCCAGCTCTTGAAAGCCATGAATGGAGGCTCATAACAGGATGTGACCCAAAAAATACTAGATGGAGTTACCACAACGGGGGATCTTGGCCAGTTCTTTTATGGCTTCTGGTTGCGGCGTCGATCAAGACTGGGAGACCCCAAATTGCGAGACGTGCCCTACAAGTGGCTGAGACCAAATTGTCAAAGGACAGCTGGCCCGAATATTATGATGGAACGTTGGGCCGATACGTTGGAAAGCAGGCCCGTAAATTCCAGACCTGGTCCATTGCTGGTTACTTGGCCGCTAGGATGATGATGGATGATCCATCACATTTAGGTCTTGTAGCACTCGAAGAAGACAAGCTGCTAAAGCCATTACTCAAGAGATCAAATTCATGGACTTTTTGA 1593 0.4357 MSSIPKDRSHKGNLKNPEALDRPKASNKESVAEVERSHNGDLKNLEAPESVAEVGKFDFLKALERPRPLNIERQRSCDERTMSELSIGISPRQLTAKAENCSRLGDHLDHLNSPLPKSGLNTPRSATFDSHSIASEAWDALRRSLVYFRGQPVGTIAALDNSDEKLNYDQVFVRDFVPSALAFLMNGEPDIVKNFILKTLRLQSWEKKIDRFQLAEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRYWIFDFMPHHGGYFLGNVSPARMDFRWFCLGNCIAILSCMATTEQSTAIMDLIESRWEELVGDMPVKVCYPALESHEWRLITGCDPKNTRWSYHNGGSWPVLLWLLVAASIKTGRPQIARRALQVAETKLSKDSWPEYYDGTLGRYVGKQARKFQTWSIAGYLAARMMMDDPSHLGLVALEEDKLLKPLLKRSNSWTF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00069 530 PANTHER ALKALINE/NEUTRAL INVERTASE B-RELATED 334 529 - -
Cca07g00069 530 Pfam Alkaline and neutral invertase 333 504 IPR024746 GO:0033926
Cca07g00069 530 Pfam Alkaline and neutral invertase 137 332 IPR024746 GO:0033926
Cca07g00069 530 Gene3D - 322 501 IPR012341 GO:0005975
Cca07g00069 530 PANTHER ALKALINE/NEUTRAL INVERTASE B-RELATED 33 332 - -
Cca07g00069 530 PANTHER - 33 332 IPR024746 GO:0033926
Cca07g00069 530 MobiDBLite consensus disorder prediction 8 43 - -
Cca07g00069 530 SUPERFAMILY Six-hairpin glycosidases 119 497 IPR008928 GO:0005975
Cca07g00069 530 MobiDBLite consensus disorder prediction 1 45 - -
Cca07g00069 530 PANTHER - 334 529 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00069 Cca-Chr7 917558 920810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00069 - - pop:7463973 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00069 07 917558 920810 Cca07g00069 07 917558 920810 ECH