Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00064 ATGGGGATTGCAGAGAACACAAAGGGTTTGGTTCTTGCGGTGGCTTCGGGTGCCTTCATAGGAGCAAGCTTCATCCTCAAAAAGAAAGGTCTGAAGCAAGCTGCTACTCACGGCACTCGCGCTGGTGTTGGCGGCCATTCTTATCTGCTACAGCCACTCTGGTGGGCTGGCATGGTTACAATGTTTATTGGAGAGGTTGCCAATTTTGTCGCTTATATATACGCTCCTGCGCTTCTCGTTACTCCCCTCGGTGCACTTAGTATTATTGTCAGTGCTGTTTTGGCGCACTTCTTGCTCAAGGAGAAGCTTCAGAAGATGGGGATTTTGGGATGTGTGTTCTGCATTGTGGGCTCAGTTCTCATTGTCATCCATGCACCTCAAGAGCATACTTTGACTTCTGTGCAAGAAATTTGGGATCTCGCCACTCAACCATTATTTCTAGTTTATGTGGCAGCAACAGTTTCGGTAGTTTTAGCCTTGATTTTGCATTTTGAACCTCGCTATGGACAGAAAAATATGCTTGTCTACTTGGGAATTTGTTCATTAATGGGCTCACTTACGGTAATGAGCACAAAAGCCATAGGGATTGCAATCAAGCTCACATTAGAGGGAATAAGTCAAATAACTTATCCTCAAACTTGGTTTTTTCTTACCGTGGCTGTCATATGTATCGTTGCACAGTTGAATTACCTGAACAAGgcgctggatacattcaacacagcaattgtctctcccgtgtattatgtcatgttcacaactttgactattattgcgagtgtgataatgtttaaggattggtctggtcagagtgcgagcagcatagcctctgagatatgtggatttgtcattgttctttcgggaacaatcttattgcatgtgacaagagaacACGAAAAATCTAACATGCAAGGGTCCTTGACATGGTATATTGGTGAGGACTTAATGAAGGGCATTGAGGATGAACACCTGAACCTTATGCATAGTTCATATTATGTTGAAAAGTGA 1005 0.3542 MGIAENTKGLVLAVASGAFIGASFILKKKGLKQAATHGTRAGVGGHSYLLQPLWWAGMVTMFIGEVANFVAYIYAPALLVTPLGALSIIVSAVLAHFLLKEKLQKMGILGCVFCIVGSVLIVIHAPQEHTLTSVQEIWDLATQPLFLVYVAATVSVVLALILHFEPRYGQKNMLVYLGICSLMGSLTVMSTKAIGIAIKLTLEGISQITYPQTWFFLTVAVICIVAQLNYLNKALDTFNTAIVSPVYYVMFTTLTIIASVIMFKDWSGQSASSIASEICGFVIVLSGTILLHVTREHEKSNMQGSLTWYIGEDLMKGIEDEHLNLMHSSYYVEK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00064 334 Pfam Magnesium transporter NIPA 6 296 IPR008521 GO:0015095|GO:0015693|GO:0016021
Cca07g00064 334 PANTHER UNCHARACTERIZED 3 333 IPR008521 GO:0015095|GO:0015693|GO:0016021
Cca07g00064 334 PANTHER MAGNESIUM TRANSPORTER NIPA6-RELATED 3 333 - -
Cca07g00064 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00064 Cca-Chr7 878310 881729 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00064 K22733 - gmx:100808127 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00064 07 878310 881729 Cca07g00064 07 878310 881729 ECH