Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00058 ATGGCATCGGAGAAAGAGGTTGAAACTGTAATAGTTGGGAACTATGAGGAAATGGAAACTGAAGGGAAGCCTAAGGATATTAAATCCAGGGTATTAAGCTTGTTGTGGCATGGTGGTTCTGTTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCTCAAGTTCTGCTTACGTTGCCATACTCATTTTCCCAACTGGGACTGCTCTCTGGAACCCTTTTTCAACTCTTCTACTGCTTGCTCGGTGGCTGGACGGCTTACCTCATTAGCGCACTCTACGTTGAATACAGAACCAGAAAAGAGAGAGAGAAATTTAACTTCAGGAACCATGTCATCCAGTGGTTTGAGGTTCTTGATGGGCTCCTGGGGAAGCACTGGAGAAACGTGGGTTTGGCCTTCAACTGCACATTTCTCCTATTTGGATCTGTTATCCAACTCATTGCTTGTGCAAGCAACATATATTACATAAATGATAATTTGGATAAGAGGACTTGGACTTACATCTTTGGAGCATGTTGTGCCACCACTGTATTTATCCCTTCCTTCCACAACTACAGAATCTGGTCCTTTCTTGGCCTCCTCATGACCACTTACACTGCTTGGTACCTCACTGTAGCCTCTCTCCTTCACGGCCAGGTGGAAGGGGTTAAGCATTCGGGTCCGACCAAATTGGTTCTATATTTTACAGGGGCCACAAACATTCTCTACACATTTGGGGGACATGCCGTTACTGTGGAGATAATGCACGCGATGTGGAAGCCTCAAAAGTTCAAGTCCATATACTTACTGGCTACCCTGTATGTGTTGACATTGACACTTCCATCGGCATCTGCAGTATACTGGGCATTTGGAGACATGCTTCTAAATCACTCGAACGCTTTTTCTCTCCTTCCAAGGTCACCCTTCCGTGACATGGCTGTCATTTTAATGCTCATCCACCAGTTTATAACATTTGGGTTTGCATGCACGCCACTGTATTTGGTGTGGGAGAAAGCAATAGGAATACACGAGTGTAGGAGCGTGTGCAAGCGTGCTTTGGCCAGGTTGCCAGTGGTGATCCCCATTTGGTTTTTGGCCATTGTTTTCCCCTTCTTTGGCCCAATCAACTCCACCGTTGGATCTCTCCTTGTCAGCTTCACCGTTTACATCATCCCCGCCCTCGCACACATGTTCACCTTCAAATCACCCGCTGCCCGACAGAATGCGGTGGAGCAACCTCCCAACTTCGTGGGAAGATGGGTGGGTGCCTACACGATCAACCTATTTGTCGTCGTCTGGATCCTGGTTGTAGGATTTGGATTCGGTGGATGGGCTAGTATGGTCAACTTTGTACACCAGATTGACACATTCGGTTTCTTCACCAAATGTTATCAGTGCCCCGCACCACACCTCAACGCCACTGCACCTTTTCCTCCTCCTCACTAA 1428 0.4727 MASEKEVETVIVGNYEEMETEGKPKDIKSRVLSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGTLFQLFYCLLGGWTAYLISALYVEYRTRKEREKFNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYLVWEKAIGIHECRSVCKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFTFKSPAARQNAVEQPPNFVGRWVGAYTINLFVVVWILVVGFGFGGWASMVNFVHQIDTFGFFTKCYQCPAPHLNATAPFPPPH 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00058 475 Pfam Transmembrane amino acid transporter protein 37 426 IPR013057 -
Cca07g00058 475 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 464 - -
Cca07g00058 475 PANTHER OS05G0424000 PROTEIN-RELATED 3 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00058 Cca-Chr7 808948 812272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00058 4 475 Organic Solute Cotransporters AT2G21050 86.229 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00058 K13946 - gmx:100806531 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00058 07 808948 812272 Cca07g00058 07 808948 812272 ECH