Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00051 ATGGCGATGGCCTTCAAGATGGCGACCACCGGAATGTGGGTGACGGATGAGTGCAAGAGCTCCTTCATGGACATGAAGTGGAAGAAGGAGCACCGATACATTGTCTTCAAGATCGACGAAGGATCAAGGCTCGTCACCGTCGATAAACTCGGCGGCCCCACTGAGGGCTACGATGATCTCACGGCCTCCTTGCCCTCCGATGACTGCCGTTACGCTGTCTTCGACTTCGACTTCGTCACCGTTGATAACTGCCGCAAGAGCAAGATCTTCTTCATTGCATGGTCTCCAACCGCATCAAGGATTAGAGCAAAGATTCTATACGCAACCTCAAAGGATGGGCTGAGAAGAGCGCTTGATGGAATCAGCTATGAACTCCAGGCCACCGATCCCACCGAGATGGGCTTCGATGTAATTAGAGACATAGCCAAATAG 432 0.5208 MAMAFKMATTGMWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIAK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00051 143 Gene3D Severin 2 143 IPR029006 -
Cca07g00051 143 SUPERFAMILY Actin depolymerizing proteins 6 140 - -
Cca07g00051 143 CDD ADF_cofilin_like 10 140 IPR017904 GO:0015629|GO:0030042
Cca07g00051 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Cca07g00051 143 PANTHER COFILIN-RELATED 5 143 IPR017904 GO:0015629|GO:0030042
Cca07g00051 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 139 IPR002108 GO:0003779
Cca07g00051 143 SMART adf_2 16 143 IPR002108 GO:0003779
Cca07g00051 143 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 5 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00051 Cca-Chr7 724337 725151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00051 K05765 - gmx:100785493 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00051 07 724337 725151 Cca07g00051 07 724337 725151 ECH