Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00044 ATGGGTGCTTTGGATCACATATCAGAGCTGTTTGACTGCTCGAGTGGGAGTTCAAAAGTGAAGAAGAGGAAGCAATTGCAGACGGTGGAGGTGAAAGTGAAGATGGACTGCGAAGGATGCGAGAGGAAAGTGAGGAAGGCGGTGGAGGGGATGAAAGGAGTCAGCCAGGTGGATGTGGAGAGGAAGGCCAACAAAGTGACGGTGGTGGGATACGTCGAGGCCTCTAAGGTGGTCGCACGCATCGCTCACCGCACAGGGAAAAAAGCAGAGCTCTGGCCCTATGTCCCATACGACGTCGTTGCGCATCCCTACGCCCCCGGAGTCTACGATAACAAAGCCCCCTCTGGTTACGTCCGGAACACCCACCACCCCAACCATTCCCATCTCGCACGTGCCACCTCCACTGAGGTCCGCTACACCACCGCTTTCAGCGACGACAATCCATCCGCCTGTGTCCTTATGTGA 465 0.5613 MGALDHISELFDCSSGSSKVKKRKQLQTVEVKVKMDCEGCERKVRKAVEGMKGVSQVDVERKANKVTVVGYVEASKVVARIAHRTGKKAELWPYVPYDVVAHPYAPGVYDNKAPSGYVRNTHHPNHSHLARATSTEVRYTTAFSDDNPSACVLM 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00044 154 Pfam Heavy-metal-associated domain 31 87 IPR006121 GO:0046872
Cca07g00044 154 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 2 154 - -
Cca07g00044 154 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 154 IPR045181 GO:0046872
Cca07g00044 154 SUPERFAMILY HMA, heavy metal-associated domain 26 93 IPR036163 GO:0046872
Cca07g00044 154 CDD HMA 30 90 IPR006121 GO:0046872
Cca07g00044 154 Gene3D - 13 93 - -
Cca07g00044 154 ProSiteProfiles Heavy-metal-associated domain profile. 35 91 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00044 Cca-Chr7 629488 630446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00044 - K10752 gmx:100780624 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00044 07 629488 630446 Cca07g00044 07 629488 630446 ECH