Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00042 ATGGATAGGCTTCTATCACCGTCTCCACCCCATTCTTTGAAAAGTTTCAACAAGTCTTTCACATTTCTCACTCGATTTGAGTCTGCAACTGCAAGATTCAAATTTTCTCCATCAACACGTTCTGACTTGAAGAGGGTCACCTCAATTTGTTGCAAGCATGAAAACCCATCTCCTTTTTCGTCTTCCATTCCCTTTCTCGCTTCTTCCAAGCACCCCAATCATTTTCCATCCGTTTCCACACACAAATCCCAATCTCTCAATCAATTCAAAACCGGCGCTTCTCAAAAGCCGAAGGCAATAACAGTTCGGACTCTTGTGATACTTTCTGCTCTTGTTATGATCTTAGTCCAACCAGCCATTGCACCAGCAGCTTTTGCAACCTTTCAAACTGCTGCCAAGACCGGTGGTCCTGCTGCTGCAGTTGGTAGAAAGCTAATCCACACTGAGCTCCTAAGTAGTGCTTGGACTGGTTTCTTTGCTGGGTGCTTGCACACCTTATCAGGGCCTGACCACCTAGCTGCTCTGGCTCCATTGTCAATTGGTCGCACCCGAATGGAGAGTGCTGCCGTGGGAGCCCTTTGGGGCTGTGGCCATGATGCTGGTCAGGTTATCTTTGGCTTAATATTTTTAGTCCTGAAGGATCAACTCCATATTGAAATTTTGCGCACTTGGGGCACCATAGTGGTGGGTCTTACACTGCTAATAATTGGTGCTATGGGAATTAGAGAAGCTTCAGAAGTACATGCTCCATGTGTTGCTTTAGAAAGTGGTGAATGCGATGTCAGCGTGTATGAATCACTTGATAATCCAGCAGTAGGAAAAAAGAAGATTGGTTTTGCGACTTTCGCCACAGGGATTGTTCATGGACTGCAACCAGATGCATTGATGATGGTGTTGCCTGCCCTTGCTTTGCCTTCTCGCTTGGCTGGTGCTGCATTCCTCATCATGTTCTTAATTGGAACCGTGTTTTCGATGGGAAGCTATACTGTATTTATAGGTTCATGTAGCCAGGCACTGAAGAATAGAATACCTAGGATAACTGAGAAGCTCACTTGGGCTTCTTCCCTTATTGCAATAGCCCTTGGATTTGCTATCATTATTAGCCAGTATTTTGGGTTTAGTCTGTATTAA 1131 0.4509 MDRLLSPSPPHSLKSFNKSFTFLTRFESATARFKFSPSTRSDLKRVTSICCKHENPSPFSSSIPFLASSKHPNHFPSVSTHKSQSLNQFKTGASQKPKAITVRTLVILSALVMILVQPAIAPAAFATFQTAAKTGGPAAAVGRKLIHTELLSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRTRMESAAVGALWGCGHDAGQVIFGLIFLVLKDQLHIEILRTWGTIVVGLTLLIIGAMGIREASEVHAPCVALESGECDVSVYESLDNPAVGKKKIGFATFATGIVHGLQPDALMMVLPALALPSRLAGAAFLIMFLIGTVFSMGSYTVFIGSCSQALKNRIPRITEKLTWASSLIAIALGFAIIISQYFGFSLY 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00042 376 Pfam Cytochrome C biogenesis protein transmembrane region 203 348 IPR039447 -
Cca07g00042 376 PANTHER EXPRESSED PROTEIN 1 376 - -
Cca07g00042 376 PANTHER UNNAMED PRODUCT 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00042 Cca-Chr7 582800 585496 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00042 - - gmx:100818218 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00042 07 582800 585496 Cca07g00042 07 582800 585496 ECH