Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00015 ATGAACAACAGCAGCATTCTCAGCCAGTTGATTTCCTCGCCTCCTGCATGGGCAACTATAATCGCAGCTGCATTTCTCGTCCCCACTCTAGCTCTCTCCATGTATCTTTTGTTCGAGCATCTTTCCGCTTACAAGAATCCCGAGGAGCAAAAGTTCTTGATTGGGGTTATCCTAATGGTTCCCTGCTATTCTATTGAATCTTTTGTATCATTGGTCAATCCTTCTATAGGCGTTGATTGCGAGATTCTAAGGGACTGCTACGAATCCTTTGCCATGTATTGCTTTGGAAGATACCTTGTTGCCTGCCTCGGCGGCGAGGAAAGGACCATTCAGTTCATGGAGAGACAGGCACCTGCTTCTCTTAAAACCCCTCTTCTACAACATTCTTCTGACAAGGGCACTGTCAACCATCCCTTTCCTCTTAACTACTTCCTTAAACCTTGGAAACTCGGTTCCGGCTTCTACCAAATTGTCAAATTTGGCATTGTTCAATATATGATAATCAAGGCTTTCACCGCTATTCTCGCTGTAATCCTTGAAGCCTTTGGAGTCTACTGTGAAGGAGAATTTAAACCAGCATGTGGGTATCCTTATGTGGCAGTGGTTCTGAATTTCAGTCAGTCATGGGCTTTGTACTGCCTTGTTCAATTTTATACTGTCACAAAGGAAGAACTGGCTCATATAAAGCCATTGGCCAAATTTTTGACATTTAAATCAATTGTGTTCCTCACTTGGTGGCAAGGTGTGGCAATTGCTCTCTTATGCACCTTTGGTCTGTTCAAAAGTCCCATAGCTCAAGGCTTGCAGTTCAAGTCAAGTGTCCAAGATTTCATCATTTGCATTGAGATGGGCATTGCTTCCGTAGTTCACCTGTATGTGTTTCCAGCAAAGCCTTATGAGCTAATGGGAGACTGCTTTCCTGGAAGCGTTTCAGTTCTGGGAGATTACTCTGCTGACTGTCCTCTGGACCCTGATGAGATTAGGGACAGTGAGAGACCCACAAAACTGCGGCTTCCTACACCTGATGTTGATACCAAGAGTGGGATGACAATTAGAGAGAGTGTTCGTGATGTTGTTATCGGTGGTGGTGGATATATTGTAAAAGATGTGAAATTCACAGTCCATCAAGCAGTGGAGCCTGTGGAAAAGGGGATCACTAGATTCAATGAGCAACTACACAGAATCTCCGAAAATATTAAGAAAAATGACAAAGATGGAAGAAGAACCAAGGATGATAGTTGCATCGTCTCATCATCACCTGCAAGGAGAGTGATTCGGGGAATCGATGACCCCCTCTTGAATGGTAGTGTCAGTGATAGTGGACTATCAAGGGGTAAGAAGCATCGCAGGAAATCTGGATATACAAGTGCAGAGAGTGGAGGAGAGAGTAGTAGTGATCAAAGTTTTGGGGGCTACCAGATTAGAGGCCGTAGGTGGGTTACTAAAGAGTAG 1452 0.4428 MNNSSILSQLISSPPAWATIIAAAFLVPTLALSMYLLFEHLSAYKNPEEQKFLIGVILMVPCYSIESFVSLVNPSIGVDCEILRDCYESFAMYCFGRYLVACLGGEERTIQFMERQAPASLKTPLLQHSSDKGTVNHPFPLNYFLKPWKLGSGFYQIVKFGIVQYMIIKAFTAILAVILEAFGVYCEGEFKPACGYPYVAVVLNFSQSWALYCLVQFYTVTKEELAHIKPLAKFLTFKSIVFLTWWQGVAIALLCTFGLFKSPIAQGLQFKSSVQDFIICIEMGIASVVHLYVFPAKPYELMGDCFPGSVSVLGDYSADCPLDPDEIRDSERPTKLRLPTPDVDTKSGMTIRESVRDVVIGGGGYIVKDVKFTVHQAVEPVEKGITRFNEQLHRISENIKKNDKDGRRTKDDSCIVSSSPARRVIRGIDDPLLNGSVSDSGLSRGKKHRRKSGYTSAESGGESSSDQSFGGYQIRGRRWVTKE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00015 483 MobiDBLite consensus disorder prediction 435 483 - -
Cca07g00015 483 Pfam Organic solute transporter Ostalpha 19 299 IPR005178 -
Cca07g00015 483 PANTHER PROTEIN LAZ1 10 477 IPR031171 GO:0009626
Cca07g00015 483 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 10 477 IPR005178 -
Cca07g00015 483 MobiDBLite consensus disorder prediction 456 471 - -
Cca07g00015 483 MobiDBLite consensus disorder prediction 399 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00015 Cca-Chr7 279633 284885 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00015 - - gmx:100807030 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00015 07 279633 284885 Cca07g00015 07 279633 284885 ECH