Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00014 ATGGAGAATAGGGCAATATTACAGGAATGGTTTGACCGAGTTGACTCGGAGAAAAGTGGAAGTATAACAGCGGTGCAGCTCAAGACAGCTCTAGGTGTGGGCAACCTGGAATTTCCACTCTCAGTGGTTGAGCAGATGATCAGGATGCACGATTTCGACAGGAATGGAACTATGAGCTTTGAAGAATTTGTTGCACTCAACAAGTTCCTTCTTAAGGTTCAACATGCATTTTCTGATCTAGAGAGGGGTCGTGGTTTTCTTGTACCTGATGATGTATTCGAGGCTTTGGTCAAAATTGGTTTCATGCTGGATTCTCCTGCTTTTTACTCTGTCTGTGAGAGCTTCGATCAAAGTAAAAATGGGAAGTTTCGGCTGGATGACTTCATATCAATCTGTATATTCTTACAATCAGCACGGAATCTATTTCATTCATTTGATACTGCAAAACAGGGCAGAGTTACTCTTGATCTGAATCAATTTGTCTATTGTAGTAAGTACACACTGAGCTACCTCATATGA 519 0.4123 MENRAILQEWFDRVDSEKSGSITAVQLKTALGVGNLEFPLSVVEQMIRMHDFDRNGTMSFEEFVALNKFLLKVQHAFSDLERGRGFLVPDDVFEALVKIGFMLDSPAFYSVCESFDQSKNGKFRLDDFISICIFLQSARNLFHSFDTAKQGRVTLDLNQFVYCSKYTLSYLI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00014 172 SMART efh_1 42 70 IPR002048 GO:0005509
Cca07g00014 172 SMART efh_1 6 34 IPR002048 GO:0005509
Cca07g00014 172 PANTHER PEFLIN 5 164 - -
Cca07g00014 172 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
Cca07g00014 172 SUPERFAMILY EF-hand 4 163 IPR011992 -
Cca07g00014 172 PANTHER PEFLIN 5 164 - -
Cca07g00014 172 ProSiteProfiles EF-hand calcium-binding domain profile. 38 73 IPR002048 GO:0005509
Cca07g00014 172 Gene3D - 1 167 - -
Cca07g00014 172 CDD EFh_PEF_ALG-2_like 7 167 - -
Cca07g00014 172 ProSitePatterns EF-hand calcium-binding domain. 51 63 IPR018247 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00014 7 128 EF-hand Containing Proteins AT4G04740 27.344 3.60e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00014 - - gmx:100792880 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00014 07 275584 279536 Cca07g00014 07 275584 279536 ECH