Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00012 ATGGACTTGCCTAATCGTGATAAACAACTGACTGTTGCTGTGAAGAAGACAGCATTGAGAGATCTGCAGAACGATAATAAAATGATTGTGCCAACCTCTGTTGGAAGCTCTTCATTTTTAAAGGATAAGGATCCTGGTACTGATTCTAATAGAGTTTCTGGCACCAAGAGACCTTTGTCTGACTACCCAGTAAACCACCATCTCCAACAATCTCCAAGCAATAATGCTGCAAATGGACATCTTGTGTATGTTCGTAGAAAATCAGAAGCAGAATTGGGCAAGGGCACTGCTTTTGAAAATCCAAGTATAAATGCTTTTTGTCCACATTCGAGGCAACTTTGTTGTGAAGAGGAGACTGCTCAACCAAAACCTCAGCCAAAGGAGACACCTAAGATAAAGGAACCAAAGGTTTCTTGTTTCCCAGCATTTGCACCTTTTCCTATGTCTTCTTCAATAAACTCATCTGGAAAGCCTTCAGTTCCTATTTCTCTAGGGAAATCTGCCATCAAGTTAGCACCAGTTGAGTCCAATTATGTGACAGCTTCTTCTGGCCCTAGCACTACTAGCATTGGTAATCCAAAGGGATTAAAAAATTACTGGGAGGAGCGATACCAACAATTGCAGATGTTTTTGAGGAAATTGGACCAATCAGACCAAGAGGAATATATCCAAATGCTTCGCTCCCTGTCTTCAGTTGAACTTAGCAAACATGCTGTTGAGTTAGAAAAGAGATCCATTCAGCTTTCATTAGAGGAAGCTAAAGAATTACAGCGTGTTGCTGCTCTAAACGTCTTGGGTAAAACAATGAAGAACTTCAAAGCGCCAGCAGATCATGATGAATGTTCAGACAAGTTGAAGACATCATTATGA 870 0.4069 MDLPNRDKQLTVAVKKTALRDLQNDNKMIVPTSVGSSSFLKDKDPGTDSNRVSGTKRPLSDYPVNHHLQQSPSNNAANGHLVYVRRKSEAELGKGTAFENPSINAFCPHSRQLCCEEETAQPKPQPKETPKIKEPKVSCFPAFAPFPMSSSINSSGKPSVPISLGKSAIKLAPVESNYVTASSGPSTTSIGNPKGLKNYWEERYQQLQMFLRKLDQSDQEEYIQMLRSLSSVELSKHAVELEKRSIQLSLEEAKELQRVAALNVLGKTMKNFKAPADHDECSDKLKTSL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00012 289 Pfam Retinal tissue protein 204 265 IPR018737 GO:0006355|GO:0070176
Cca07g00012 289 PANTHER INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN 2 278 - -
Cca07g00012 289 MobiDBLite consensus disorder prediction 29 43 - -
Cca07g00012 289 MobiDBLite consensus disorder prediction 29 75 - -
Cca07g00012 289 PANTHER INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN 2 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00012 - - gmx:100803861 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00012 07 253535 258727 Cca07g00012 07 253535 258727 ECH