Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00010 ATGGAGACTCATCCCGGAATATCTCCACCTCCACTTCTACTTGTTTTTGTCTTTTCGGTATGGATCTTTAGGGTTTATGCTCTCCTTCTCTCAATTTTTAATTATTTTATGCAGGATATTGATATAATTGCAACATACAGCGATGCTTCTGGCCATGTTCGACTCGCAAGGTTGAAAATGAGGGATTTATCTGATTCCTGGATTTGGGAAAACCCTACTAATGGAAACAATGAATTTCAAAAGAGCTCCCAGGAATTGATGGAATCATTTCAAACTGACTCAAGATTTGAAGACAATGGCAAGCACTCCACAGATGAACATTATCCTGAAGAAAACAAAATTGACATTCCCCGTTCCTCATCAATGACGCCAATGAAGATCAAGCGTCAGATAATGCGGCAAGAAAGACGGAAAGCTCGTGCATCGGAACTTATTCAAGAAGACAAAGAAACCGACAATCACATTGTATCAGCAGCAATTGAACGCTCTGAAGGATTTGATACCACTATCAAGGGAAAGTATAGTATATGGAGGAGAGAATATGAAAACCCAAATTCTGATTCAACTCTGAAACTCATGCGAGATCAAATAATAATGGCCAAAGCATATGCCAACATTGCAAAGTCCAAGAACAAAACTGTTCTATACGAAGCTCTTGTCAAACACTCCAGAGATAGTCAACAAGCTATAGGAGAAGCCAGTTCTGATATCGAGCTTCACCTTGGAGCACTTGATCGAGCAAAATCTATGGGTCATGTTCTTTCCATAGCAAAGGACCAACTTTATGACTGCCTTTTGGTGGCAAGGAAGTTCAGGGTGATGCTTCAATCAACCGAAGATAGAGTGAATATACAGAAGAAAAGAAGTGCATTCTTGATTCAGCTGGCTGCAAAAACTGTGCCTAGACCATTGCATTGCCTTCCCCTACAACTTGCAGCGGATTATTACCTGCAGGGCTATCATAAGAAAGGAAATCTTGACAAAGAAAAGGCTGAAGATCCATCTCTTTACCACTATGCTATCTTTTCTGATAATGTATTGGCTACATCTGTGGTTGTTAATTCTACTGTGCAGAATGCAAAGGAACCTGAGAAGCATGTTTTCCATATAGTGACGGATAAACTGAATTTTGCATCAATGAGAATGTGGTTTCTCGTCAACCCTCCTTCTAAAGCAACCATTGAAGTTCAGAATATTGATGATTTCAAGTGGCTGAATTCCTCATATTGTTCAGTTCTACGTCAACTTGAATCGGCAAGAATAAAGGAATATTACTTTAAAGCTAATCATCCTTCCTCCCTCTCTGTTGGTTCTGACAATCTAAAATATAGAAATCCTAAATATTTGTCAATGCTAAATCACCTAAGGTTCTACCTTCCTGAAGTTTATCCAAAATTAAACAGAATTCTATTCTTGGATGATGACATTGTAGTGCAGAAAGATTTGACACCTCTTTGGTCAATTGATTTGAAAGGTATGGTGAATGGTGCTGTAGAGACATGCAAGGAGAGCTTCCATAGGTTTGATAAATACCTAAACTTTAGTAATCCACTGATTTCCAATAACTTCAGTCCTGAGGCGTGTGGCTGGGCATTTGGTATGAATATTTTTGACTTGAAGGAGTGGAAGAAACGAAACATCACTGGTATCTATCATCGGTGGCAAGATATGAATGAGGATAGAACCCTCTGGAAGCTTGGGACCTTACCCCCGGGATTAATCACCTTTTATAATCTGACCTATCCGTTAGATCGAGGCTGGCATGTTTTGGGACTTGGCTATGACCCAGCTCTGAACCTAACAGAGATAGAAAATGCCGCTGTCATTCACTACAATGGAAACTACAAGCCGTGGTTGAATCTTGCTGTTTCCAAATATAAATCGTACTGGTCCAGATATGTTATGTTCGATAATCCGTATCTTCGAGTTTGCAACCTTAGCGAATAG 1947 0.3965 METHPGISPPPLLLVFVFSVWIFRVYALLLSIFNYFMQDIDIIATYSDASGHVRLARLKMRDLSDSWIWENPTNGNNEFQKSSQELMESFQTDSRFEDNGKHSTDEHYPEENKIDIPRSSSMTPMKIKRQIMRQERRKARASELIQEDKETDNHIVSAAIERSEGFDTTIKGKYSIWRREYENPNSDSTLKLMRDQIIMAKAYANIAKSKNKTVLYEALVKHSRDSQQAIGEASSDIELHLGALDRAKSMGHVLSIAKDQLYDCLLVARKFRVMLQSTEDRVNIQKKRSAFLIQLAAKTVPRPLHCLPLQLAADYYLQGYHKKGNLDKEKAEDPSLYHYAIFSDNVLATSVVVNSTVQNAKEPEKHVFHIVTDKLNFASMRMWFLVNPPSKATIEVQNIDDFKWLNSSYCSVLRQLESARIKEYYFKANHPSSLSVGSDNLKYRNPKYLSMLNHLRFYLPEVYPKLNRILFLDDDIVVQKDLTPLWSIDLKGMVNGAVETCKESFHRFDKYLNFSNPLISNNFSPEACGWAFGMNIFDLKEWKKRNITGIYHRWQDMNEDRTLWKLGTLPPGLITFYNLTYPLDRGWHVLGLGYDPALNLTEIENAAVIHYNGNYKPWLNLAVSKYKSYWSRYVMFDNPYLRVCNLSE 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00010 648 CDD GT8_like_1 337 634 - -
Cca07g00010 648 SUPERFAMILY Nucleotide-diphospho-sugar transferases 337 640 IPR029044 -
Cca07g00010 648 Pfam Glycosyl transferase family 8 306 621 IPR002495 GO:0016757
Cca07g00010 648 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 27 647 IPR029993 GO:0047262
Cca07g00010 648 MobiDBLite consensus disorder prediction 90 118 - -
Cca07g00010 648 PANTHER GALACTURONOSYLTRANSFERASE 3-RELATED 27 647 - -
Cca07g00010 648 MobiDBLite consensus disorder prediction 91 114 - -
Cca07g00010 648 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 339 638 IPR029044 -
Cca07g00010 648 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00010 Cca-Chr7 198710 209020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00010 37 648 Glycosyltransferase AT4G38270 68.336 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00010 K13648 - gmx:100781749 1144.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00010 07 198710 209020 Cca07g00010 07 198710 209020 ECH