Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02057 ATGTCGATAACCGGCATCCAGGGGCAACCTCTTGAGGTCACCGTTGTGTCGTGTTCCAAGTTGAAGGATACTGAATGGATTTCAAGGCAAGATCCGTACGTTTGTGTCGAATATGGCAGCACTAAGTTCCGAACCAGAACATGCACAGACGGCGGAAAAAATCCTGTATTCCAAGAGAAATTCATCTTTCCCCTCATCGAAGGCCTTCGGGAGATCAATGTCCTTGTTTGGAACAGCAATACTCTCACCTTCGACGATTTTATCGGAAGCGGAAAGATTCAATTGCACAAGGTTCTTTCTCAAGGTTTCGATGACTCTGCTTGGCCACTTCAGACCAAATCTGGCAGATACGCTGGGGAAGTAAAAGTCATATTGCATTATGCAATTGCAAGTCAAAGGCAGCAGAAATCAAGCTCAAGCCATACTCCATCAGCACCTCCCTACGTCCCAACAGCAACTCCCTCCGTTCCTTCATATTCTACTTCCTACCCACCACCTCCTTACCATCCAACTGGATCTTACCCACAAGTAGCATCAACACTTTCATACCCTCCACCTCCCACAGCTTACCCCCCCTATCCTTCACATTCATCTCCCTATCCACCGCCCTCATATCCTGCTTCATCTCCCTATCCACCATCCTCATATCCTCCTCCCCCTTCATACCCCCCTGCTTCAGCTTATCCACCACCTGCAGCCTATCCTCCTGGAATATACCCTCCACCACCATACTGA 735 0.4857 MSITGIQGQPLEVTVVSCSKLKDTEWISRQDPYVCVEYGSTKFRTRTCTDGGKNPVFQEKFIFPLIEGLREINVLVWNSNTLTFDDFIGSGKIQLHKVLSQGFDDSAWPLQTKSGRYAGEVKVILHYAIASQRQQKSSSSHTPSAPPYVPTATPSVPSYSTSYPPPPYHPTGSYPQVASTLSYPPPPTAYPPYPSHSSPYPPPSYPASSPYPPSSYPPPPSYPPASAYPPPAAYPPGIYPPPPY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02057 244 MobiDBLite consensus disorder prediction 147 172 - -
Cca06g02057 244 Pfam C2 domain 11 101 IPR000008 -
Cca06g02057 244 SMART C2_3c 10 107 IPR000008 -
Cca06g02057 244 CDD C2 11 108 - -
Cca06g02057 244 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 127 IPR035892 -
Cca06g02057 244 MobiDBLite consensus disorder prediction 180 222 - -
Cca06g02057 244 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Cca06g02057 244 MobiDBLite consensus disorder prediction 134 222 - -
Cca06g02057 244 Gene3D C2 domain 9 128 IPR035892 -
Cca06g02057 244 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 4 243 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02057 - - gmx:100778230 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02057 06 35799617 35801393 Cca06g02057 06 35799617 35801393 ECH