Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02056 atgaagatgaaGCATAACTGGTGGCAGATCCTGATAGTAATAATGATATTTGTGTTGGGGTTGGCATGTTGTGTGGCGGAGGATGAATTGTGTGGTGTGGAAAGGAGGGAAGAGTACGAGTATGGAAGAATCATTGATATAAGTCACAGGTACCATCCTGATATGCCAGCCTGGGAATCAAAGGATAGTCTTGGACAGTTCGTGTGGCTTACAAGAAGCATGGCCAATGGCTCTATCGCCAACTTCTCCCAATTCAAACTCCCCGCTCACAGTGGCACTCATGTCGACGCTCCTGCACACGTTTTCGATCATTACTTCCATGCTGGCTACGATGTCGACTCCCTCGACTTACAACTCCTCAATGGTAATTCCTACCCTAAACACAAACATCACCACTTCAATTTTAATTTCATACTATTTCTCTATGCTCATGTTTTATCATGTAGGCGGCTTATGTATCAGAAGGAATTTGACTCAAGCTATGTGGGATTCACGGAAGATGGAGCAGATTGGCTAGTGAAGAACACCGACATCAAGCTTGTAGGAATCGATTACCTATCTGTTGCTGCTTTCGACCACTTGATTCCAGCTCACCTTGTTTTTCTTGAAGGAAGGGAAATCATTATCGTGGAAGGCCTGAAGCTTGATGATGTGGCAACAGGAATATATACAGTCCATTGCTTACCTCTTAGGTTGGCTGGTGCTGAGGGATCACCCATAAGATGCATCCTCATCAAATAA 741 0.4386 MKMKHNWWQILIVIMIFVLGLACCVAEDELCGVERREEYEYGRIIDISHRYHPDMPAWESKDSLGQFVWLTRSMANGSIANFSQFKLPAHSGTHVDAPAHVFDHYFHAGYDVDSLDLQLLNGNSYPKHKHHHFNFNFILFLYAHVLSCRRLMYQKEFDSSYVGFTEDGADWLVKNTDIKLVGIDYLSVAAFDHLIPAHLVFLEGREIIIVEGLKLDDVATGIYTVHCLPLRLAGAEGSPIRCILIK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02056 246 Gene3D Putative cyclase 136 245 IPR037175 GO:0004061|GO:0019441
Cca06g02056 246 Pfam Putative cyclase 45 188 IPR007325 GO:0004061|GO:0019441
Cca06g02056 246 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Cca06g02056 246 Gene3D Putative cyclase 40 125 IPR037175 GO:0004061|GO:0019441
Cca06g02056 246 PANTHER CYCLASE-LIKE PROTEIN 2 12 246 IPR007325 GO:0004061|GO:0019441
Cca06g02056 246 SUPERFAMILY Putative cyclase 41 245 IPR037175 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02056 Cca-Chr6 35790781 35796597 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02056 - - gmx:100816766 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02056 06 35790781 35796597 Cca06g02056 06 35790781 35796597 ECH