Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02053 ATGGGAAATGATGTTGTGCATGTGTTGCTTGTGTCGTTCCCAGGACAAGGGCACGTGAATCCTCTTCTGAGGCTTGGCAAGTGGCTGGCCTCAAAAGGTTTGCTGGTGACCTTCTGCACACCCCAAACATGGGGAAAGCAGATGAGAGAAGGCAGCGATATCTCGGAGGAGGCAGTCGGGGAGGGGTTCCTAAGGTTCGAATGCTTCGAAGACGGGTGGAGCGACGACGACCCAAGGCGGCAAGATTTGGAGCAATACCTCCCCCAACTGGAGAAGGCGGGGAAGCAAGCCCTCCCTTCCATGATCCGCCGCCACGCCCAAAAAGGCCCTCCCGTCGCCTGCCTCATCAACAACCCTTTCATTCCATGGGTAACTGACGTGGCGGAATCCCTCTCCCTCCCTTCCGCCATGCTCTGGGTTCAATCCTGTGCTTCCTTTTCCGCATACTATCACTACCACCACAAACTCATCCCTTTCCCCTCCCAAGCCCAGCCCCATCTCGACGTTCAGCTTCCCTGCATGCCCTTGCTCACACACCACCAAGTCCCCACCTTCCTCCATCCCTCCACTCCCGAACCCTTCCTCGGAAGGGCAATCCTCCAACAGTTGTCCAACTTGGAAAAAACCTCGTGCATTCTCATGGACACGTTCCAGGAGCTGGAGGCTGACGTGCTGGACTACATGTCAAAGATTTGTCATGTTCCTATTAAAACGGTGGGGCCCTTGTTCAAGGCATCAGAGAGCGTGCACGGGGAGTCCGAGTGCATGATCAAGTGGCTTGACTCAAAGGAAGCCTCTAGCGTGGTGTACGTATCCTTCGGCAGCGTGGTGCACTTGAAGCAGGAGCAAGTGGATGAGATCGCGCACGGCCTTCTGGAGTCGGGGCTTTGTTTCCTGTGGGTGATGAAGCCGCCTCAGAAACACAGCGGAAAAGAGGCCCACGTGGTTCCGCATGGGTTTCTCGAGAAGGCTGGGAACAAGGGGAAAGTGGTGCAGTGGTGCCGGCAGGAGCAAGTTCTTGGTCACCCCTCCATCTCATGCTTTCTCACTCACTGTGGGTGGAACTCGTCCGTGGAGGCACTCACCTTTGGTGTTCCCCTTGTGGCGTTCCCGCAGTGGGGGGACCAAGTCACCAATGCAAAGTACTTGGTGGATGTGTTCCAAGTGGGTGTTAGGATGTGCTGGGGTGAGGCTGCTAATGAATTGATCAAGAGGGATGAGGTGATGCGCTGTTTGTTCGAGGCAACTCTTGGCCCCATGAAGCAGAATGCCCTCAACTTTAAGGCCGCAGCAGAAGCCGCAGTTGCGCAACCAGCTGGTTCTTCTCACCGCAATATGGACGCATTTGTCGATCAACTCAGCAAGAGAAGCCTACAAATTCTGAAAAACTACGCCAATGCTGCTTCTCTCAACTCACCCTCCCTTCCAATTTAA 1434 0.5502 MGNDVVHVLLVSFPGQGHVNPLLRLGKWLASKGLLVTFCTPQTWGKQMREGSDISEEAVGEGFLRFECFEDGWSDDDPRRQDLEQYLPQLEKAGKQALPSMIRRHAQKGPPVACLINNPFIPWVTDVAESLSLPSAMLWVQSCASFSAYYHYHHKLIPFPSQAQPHLDVQLPCMPLLTHHQVPTFLHPSTPEPFLGRAILQQLSNLEKTSCILMDTFQELEADVLDYMSKICHVPIKTVGPLFKASESVHGESECMIKWLDSKEASSVVYVSFGSVVHLKQEQVDEIAHGLLESGLCFLWVMKPPQKHSGKEAHVVPHGFLEKAGNKGKVVQWCRQEQVLGHPSISCFLTHCGWNSSVEALTFGVPLVAFPQWGDQVTNAKYLVDVFQVGVRMCWGEAANELIKRDEVMRCLFEATLGPMKQNALNFKAAAEAAVAQPAGSSHRNMDAFVDQLSKRSLQILKNYANAASLNSPSLPI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02053 477 Gene3D Glycogen Phosphorylase B; 247 433 - -
Cca06g02053 477 Gene3D Glycogen Phosphorylase B; 11 446 - -
Cca06g02053 477 CDD GT1_Gtf-like 7 424 IPR002213 GO:0008194
Cca06g02053 477 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 454 - -
Cca06g02053 477 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 5 458 - -
Cca06g02053 477 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 5 458 - -
Cca06g02053 477 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 254 386 IPR002213 GO:0008194
Cca06g02053 477 ProSitePatterns UDP-glycosyltransferases signature. 333 376 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02053 Cca-Chr6 35768395 35769828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g02053 6 453 Glycosyltransferase AT4G15480 52.586 1.03e-178 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02053 K23279 - aprc:113870335 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02053 06 35768395 35769828 Cca06g02053 06 35768395 35769828 ECH