Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02051 AGCTCACGACTACACTTTATAGGAACCTGGCGTAATCGGTATCGAAAGCGTTTTCCCATCTTGTCTACTGGGTTTAACAATGAAAATTCTGATATCAGTGCCTCTGATATTTCTCATAATTCAGTCATTATGCATGTTGACATGGACTGCTTTTTTGTCTCAGTGGTTATCAGGAACCACCCCGAATTGTTGAACCAGCCTGTAGCTGTATGTCATTCAAATAATTCAAATGGAACTGCTGAAATTTCCTCTGCAAACTACCCATCTCGTAGTCATGGTATTAGGGCCGCTTACGAGGAAGTAGCTGATCAGTTTTATAGTATATTGCATCGGTGTTGCAACAAAGTGCAGgctgtaagctgtgatgAAGCATTTTTAGATGTGACAGATTCAGAGGTTGAAGATCCTGAACTTTTAGCTTCATTAATTAGAGAAGAGATCTATAAGACCACTGGATGTACAGCGAGTGCTGGTATTGCTCAAAATATGCTTATGGCTCGAATTGCTACTAGAATTGCAAAACCAAATGGTCAATATTACATAACTACAGAAAAGGTTGAAGATCATTTATGTCAACTCCCAATTAATGCACTTCCTGGAATAGGGTATGTTTTACAGGAGAAGTTGAAGAAACAGAATGTTCACACATGTGGACAATTGCGCATGATTTCCAAGGCTTCACTGCAAAAGGACTATGGTATGAAAACAGGAGCAATGCTGTGGAATTATAGCAGAGGAATTGATAATCGGTTAGTTGGGTGCTTTCAGGAAAGTAAGTCTGTTGGTGCTGATGTAAATTGGGGTGTGAGATTCAATGATATAAAAGATTGTGAACACTTCCTAATAAACCTATGCAAGGAGGTCTCATTACGATTACAGGGTTATGGAGTGCATGGACGCACTTTCACTTTGAAGATCAAAAAAAGAAGAAAAGATGCTGATGAACCTGCAAAGTTTATGGGCTGTGGGGACTGTGAAAATTTGAGTCACTCAACAACGATTCCTCTTGCTACTGATAATGTGGAAATACTCCAAAGAATAGTAAAGCAGCTGTTTGGATGTTTTTTCATAGATGTTAAGGAGATTCGAGGTATTGGCTTGCATGTTTCCAGACTTGAAAGTGCAGAGGCTTCTAAACAAGGTACAGCAAAATATTCTTTGAAATCATGGCTCACTCCTGGATATGCAAGTATGGAAAATCAGAAATATCCTATGGGCCATGAGAAGCAGAACATGGGTAGCACTTCCAGTCGTGCATGTAGAGATTTGCAAGGGTCTTCAGTTGTAATGGACAATAAAATACCAAATAACCAAGCTAGTACCGACCCAATTCCAACACCTCCTCCTTTATGTAACCTTGATGTGGAAGTTATAAGGAATCTTCCTCCGGAAGTATTTTCAGAATTAAATGAAATTTACAGAGGGAAGTTAATTGATTATATTGCTAACAGGAACAACAAAAGTGAGAGTTCTAGCCCTTCAGGAAACTCATTTTCAGAGCAAGCAATAAACAAGGAAGAGGAACTTTCTTATTCCGAGCCAATTCCTCAAAACAATCAATTATCAAAAAATAAGGCAAAGCAGTTTGAGGCGGACACAGGCGAAGGTGAAGCATTGGATACTCACCATTCAAGTTTTGATAAAGATGATTTATTGCCTAATTCTTTAAGTCAAGTTGATGGTTCAGTGTTTCAACAATTGCCCGAGGATTTGAAAGCTGTCATTATTGAGCAGCTTCCTGCGCACAGGAGGCCAGAGATTTGCTCCAATGTTGTTGTGGTCCCTCCTCTTGAAAACCATTCGGTGTCAGTAGGTGTTGAAATTTCGGAGAGTTTTCCTGGATCAAATTATCGTGACAGTCTATGGGCTGGGAACCCTCCAAATTGGGTTGGGAAGTTTAAAGTCAGCAGTTGCTTAATATTAAAGAAATTTGCAGAAATGTATCACAAATCAGGATTGACTAGCACATTATCTTCAATTTTGCACCAAATTACATCTGAGTTGTATGAGCTAAATCTAGCCCAGCTGTTTTCTGATGAAACTGTTAACATTATGTGTGAGCTACTGAGGCAGTATATCAAAGTGAAGATAGAAAGAGATATTGAAGAAATTTATATTTGTTTTCGGCTTCTAAAAAGGTTTGCAGCAAAGTCCCAGTTTTTCCTACAAGTGTATAATAGCGTATGTCCTTACCTTCAGGCAGTTTCAACGAGGTCGGATCCAATTCAGCAGTTGCTATTCACAAGTGATGTGCTGCAGAGTTTATGTCCATTGCACAACAACCGAACAACTTACCTCTTTATTCTTTGTATTTTTATAACAGGCAGCACAATCCAAGATGCAACAGTGAAATGGAAGAACTATAGCTCACTAGACTATCAAAAGGCAGAAGATTAA 2397 0.3863 SSRLHFIGTWRNRYRKRFPILSTGFNNENSDISASDISHNSVIMHVDMDCFFVSVVIRNHPELLNQPVAVCHSNNSNGTAEISSANYPSRSHGIRAAYEEVADQFYSILHRCCNKVQAVSCDEAFLDVTDSEVEDPELLASLIREEIYKTTGCTASAGIAQNMLMARIATRIAKPNGQYYITTEKVEDHLCQLPINALPGIGYVLQEKLKKQNVHTCGQLRMISKASLQKDYGMKTGAMLWNYSRGIDNRLVGCFQESKSVGADVNWGVRFNDIKDCEHFLINLCKEVSLRLQGYGVHGRTFTLKIKKRRKDADEPAKFMGCGDCENLSHSTTIPLATDNVEILQRIVKQLFGCFFIDVKEIRGIGLHVSRLESAEASKQGTAKYSLKSWLTPGYASMENQKYPMGHEKQNMGSTSSRACRDLQGSSVVMDNKIPNNQASTDPIPTPPPLCNLDVEVIRNLPPEVFSELNEIYRGKLIDYIANRNNKSESSSPSGNSFSEQAINKEEELSYSEPIPQNNQLSKNKAKQFEADTGEGEALDTHHSSFDKDDLLPNSLSQVDGSVFQQLPEDLKAVIIEQLPAHRRPEICSNVVVVPPLENHSVSVGVEISESFPGSNYRDSLWAGNPPNWVGKFKVSSCLILKKFAEMYHKSGLTSTLSSILHQITSELYELNLAQLFSDETVNIMCELLRQYIKVKIERDIEEIYICFRLLKRFAAKSQFFLQVYNSVCPYLQAVSTRSDPIQQLLFTSDVLQSLCPLHNNRTTYLFILCIFITGSTIQDATVKWKNYSSLDYQKAED 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02051 798 Gene3D - 99 196 IPR043128 -
Cca06g02051 798 MobiDBLite consensus disorder prediction 513 546 - -
Cca06g02051 798 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 257 370 IPR036775 GO:0003684|GO:0006281
Cca06g02051 798 Pfam impB/mucB/samB family C-terminal domain 258 379 IPR017961 GO:0003684|GO:0006281
Cca06g02051 798 MobiDBLite consensus disorder prediction 528 546 - -
Cca06g02051 798 MobiDBLite consensus disorder prediction 513 527 - -
Cca06g02051 798 Pfam impB/mucB/samB family 46 97 IPR001126 GO:0006281
Cca06g02051 798 Pfam impB/mucB/samB family 96 170 IPR001126 GO:0006281
Cca06g02051 798 Gene3D - 257 380 IPR036775 GO:0003684|GO:0006281
Cca06g02051 798 Gene3D - 197 247 - -
Cca06g02051 798 PANTHER DNA REPAIR PROTEIN REV1 1 735 - -
Cca06g02051 798 Gene3D - 51 98 - -
Cca06g02051 798 ProSiteProfiles UmuC domain profile. 43 202 IPR001126 GO:0006281
Cca06g02051 798 SUPERFAMILY DNA/RNA polymerases 37 252 IPR043502 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02051 K03515 - gmx:100778409 1305.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02051 06 35730777 35755323 Cca06g02051 06 35730777 35755323 ECH