Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02047 ATGTCTACTTTGGCTGTCCTATCTGCGTTATTTCTCCTTCTTCAATGTCCTCTCTTATCCCTCTCAACCAACTCTGAAGGAAAAGCTCTTAATGCTTTGAGAAGAAGACTTTCTGACCCCAACAACGTGCTACAGAGCTGGGACCCAACTCTCGTTAATTCTTGTACTTGGTTTCATGTTACCTGCGACTCCAACAATCACGTCATTCGCTTAGACTTGGGCAATTCTAACATCTCTGGAACCTTGGGCCCAGAACTTGGCCAGCTACCCCACCTTCAATACCTGGAGCTCTATAGGAATAACATAAGTGGCAAGATTCCTGAAGAAATTGGTAACTTAAAGAACCTTATTAGTATGGATTTGTATGATAACCAATTAGAAGGGAACATCCCAAAGTCATTTGGCAAGTTGAAGTCACTTAAATACCTACGATTAAACAACAACAAGCTCACAGGATCAATCCCAAGAGAGCTCATTCATCTTAAAAATCTCAAAATCTTTGATGTTTCTAATAATGACCTCTGTGGAACAATACCAGTAGAAGGCAACTTTGAATCCTTCCCAATGGAAAGTTTTGAGAATAACAAATTCAGCGGCCCAGAACTGAAAGGACTGGTTCCTTATGATTTTGGATGCTGA 639 0.4069 MSTLAVLSALFLLLQCPLLSLSTNSEGKALNALRRRLSDPNNVLQSWDPTLVNSCTWFHVTCDSNNHVIRLDLGNSNISGTLGPELGQLPHLQYLELYRNNISGKIPEEIGNLKNLISMDLYDNQLEGNIPKSFGKLKSLKYLRLNNNKLTGSIPRELIHLKNLKIFDVSNNDLCGTIPVEGNFESFPMESFENNKFSGPELKGLVPYDFGC 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02047 212 Gene3D Ribonuclease Inhibitor 22 203 IPR032675 -
Cca06g02047 212 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Cca06g02047 212 Pfam Leucine rich repeat 119 174 IPR001611 GO:0005515
Cca06g02047 212 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 2-LIKE 6 189 - -
Cca06g02047 212 SUPERFAMILY L domain-like 23 200 - -
Cca06g02047 212 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02047 Cca-Chr6 35690220 35691856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g02047 6 195 Receptor kinase-like Gene Family AT1G71830 58.947 1.44e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02047 - - var:108324167 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02047 06 35690220 35691856 Cca06g02047 06 35690220 35691856 ECH