Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02046 ATGGGTGAAGAGGGCAACAAAGTAACGCTATTGCCTCTGATAGCTCTAATATTCTATGAAGTATCTGGCGGTCCTTTCGGAGTAGAGGATTCAGTGAGGGATGGAGCTGGTCCTCTTCTATCGTTGCTTGGTTTCTTCTTTTTCCCTCTCATATGGAGCATACCAGAAGCTCTCGTCACCGCTGAACTCGCCACCACCTTCCCTCTAAACGCTGGATACGTTATTTGGATATCCTCAGCCTTTGGACCCTTCTGGGGCTTTCAAGAAGGCTTCTGGAAATGGTTCAGCGGAGTCATGGACAATGCCCTCTACCCCCTTCTCTTCCTCGATTACATCAAGCATTCATTCCCAATCTTTCAACGAACCACTGCTCGAATCCCTGCCCTTCTAGGAATCACCCTTTCTCTCACTTATTTCAATTACCGCGGCCTTCACTTTGTTGGCTTTTCTGCTGTTTTTCTCGCCGTCTTCTCACTTTCCCCATTTCTCATAATGGCCTTGCTTTCCATTCCACGCATTAGGCCCAGCCGTTGGCTTCTTGTAGATTTTCGCAAGGTTAATTGGCGGGGATACTTCAATACCATGTTCTGGAACCTAAATTATTGGGACAAGGCAAGTACCCTTGCAGGAGAGGTTCAAAATCCCAGCAAGACGTTCCCAAAAGCACTTGTTGGAGGACTTCTTTTGGTGCTCTCCTCATATCTCATTCCACTTCTTGCTGGAACTGGTTCTTTGAGCTCCTCGCCAACTGAGTGGACTGATGGTTATTTTGCACAAGTGGGGATGCTCATTGGTGGCTCCTGGCTCAAACTCTGGATTCAAGCCGCCGCTGCTATGTCTAACCTTGGCTTGTTTGAAGCAGAAATGAGCAGTGATGCTTTTCAGCTTCTAGGGATGAGCAAGATAGGAATGCTTCCAGCTGTATTTGCTTCAAGGTCTAAGTATGGAACGCCCACTGTTAGCATTTTGTTCTCTGCCACTGGAGTTATCTTCTTGTCGTGGATGAGCTTTCAGGAAATCATAGAGTTCCTCAATTTCTTATATGCTGTAGGAATGCTTCTTGAGTTTGCAGCTTTTGTAACTTTGAGGGTGAAGAAGCCAAATCTTTATAGACCGTACAGAGTTCCATTGGGAACATTTTGGGCTACAATGCTCTGTTTGCCTCCTGCTTTGTTACTTATTCTTGTAATGTGTTTGGCTTCTTTGAGAACATTCTTTGTGAGTGGAGCAGTCATTCTCCTGGGGTTTATCCTATACCCTATCTTGGCTCAAGCCAAAAGTAAGAATTGGATTCTATTCGAAACTGAACCACCTTCCTTACATTCCACTGGATGGCAGCAATGCCATTCAGTTGTGGAAGAATTGACTGAAACTAACCAAGAAAATAAGGTCGTAGAGCTCTGTGTGGAAGAAGAATTGTCTTTAATGCAAAGTGATTCTAAACCAAGTTAG 1452 0.4497 MGEEGNKVTLLPLIALIFYEVSGGPFGVEDSVRDGAGPLLSLLGFFFFPLIWSIPEALVTAELATTFPLNAGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPLLFLDYIKHSFPIFQRTTARIPALLGITLSLTYFNYRGLHFVGFSAVFLAVFSLSPFLIMALLSIPRIRPSRWLLVDFRKVNWRGYFNTMFWNLNYWDKASTLAGEVQNPSKTFPKALVGGLLLVLSSYLIPLLAGTGSLSSSPTEWTDGYFAQVGMLIGGSWLKLWIQAAAAMSNLGLFEAEMSSDAFQLLGMSKIGMLPAVFASRSKYGTPTVSILFSATGVIFLSWMSFQEIIEFLNFLYAVGMLLEFAAFVTLRVKKPNLYRPYRVPLGTFWATMLCLPPALLLILVMCLASLRTFFVSGAVILLGFILYPILAQAKSKNWILFETEPPSLHSTGWQQCHSVVEELTETNQENKVVELCVEEELSLMQSDSKPS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02046 483 Pfam Amino acid permease 35 393 IPR002293 GO:0016020|GO:0022857|GO:0055085
Cca06g02046 483 Gene3D Amino acid/polyamine transporter I 6 436 - -
Cca06g02046 483 PANTHER POLYAMINE TRANSPORTER PUT1 6 454 IPR044566 GO:0022857
Cca06g02046 483 PANTHER BNAA05G20530D PROTEIN 6 454 - -
Cca06g02046 483 PIRSF AA_transporter 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02046 Cca-Chr6 35676211 35678453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g02046 7 439 Organic Solute Cotransporters AT3G19553 78.490 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02046 - - vun:114172952 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02046 06 35676211 35678453 Cca06g02046 06 35676211 35678453 ECH