Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02036 ATGACCGTGCAGTGGCTTGTGGCTCACCCAAAATTTCAAAAAAATCCTGTATACATCGCTGGCGATTCTTACTCCGGTATCCCTGTTCCAGTCATTGTCAAGAAAGTTTCTGATGGTAACACAGCTGGAAATTTACCGCTAATCAACCTCAAAGGTTATGTTCTAGGAAACCCGTTAACCGACTGGAAACATGACTTCAACTCGAGAATTAAGTTTGCTCATAGAGTAGGACTTTTATCTGATGAACTCTACGAGGAAACTAAATTGGATTGTCAAGGAGAGTACGTTTTCCCACACGTTGTGTTTCCTGGGTGTCTACGGAAACCCTTTGCCGTGGTTGGTAGAATTTCAGGAACCATTCCTTCACCTCATCGccgtttccttctttcttccttttccttttccatttccAGAATGGCTGAGAGTACGAGTGATGAATCATTGTTGGCTCGTATCCAACAATTGGAACAGGAGCGTGATGAATTACGTAAAGATATAGAACAGTTATGCATGCAGCAAGCTGGGCCTGCCTATCTTGCTGTGGCTACCCGAATGCATTTTCAAAGGACAGCTGGATTGGAGCAGGAGATTGAGAGTTTGAAAAAGAAGTTGGCTGCTTCCTCTAGAGACAATCTAAATCTACAAGAGGAGCTTTCTGAGGCATACAGAATTAAAAGTCAACTGGCAGAACTACACAGTGCTGAGGTTTCAAAGAATATGGAAGCTGAGAAGCAGGTCAAGTTTTTCCAAGGTTGTGTGGCTGCTGCTTTTGCTGAAAGGGATCAAGCAATAATTGAGGCTGAAAAGGCCAAAGAAAAGGAGGAGACAATGTCACAACAAATAAATGGCATAGATAAGAGGGTAGAGGAGCTCACCTCAAATTGTCTTAAATTAAAGGAACGTAATGATGCTCTGCAGATTGACCAAGCAGTGCATATGAAGCAAAATGAAAATTTAAAGGAGGTAATCAATAAGTTCTTTCAAATCAGGCAACATTCTCTGAAAGAATTTGAAGATGCAAGTTGGGATGAGAAATGTGCATGTCTTTTAGGTGACCCTGAGGAGGTGTGGAGTTACAATGATGCTTCCACCTCTAAATACATTAGTGCATTAGAAGATCAGCTGGAGAGACTAAGGAGTTCTGTGGATTATCTTCAAAATAAATTAAGGGTGGGCTTGGAAATTGAAAATCATTTGAAGAAGAGAGTCAATGTACTGGAAAAGAAACGAATTTCCATGGACAAAGTGATTGAAAATGGCATAGCGGACTTGCAACATTATCATTCTCAGTGTAGGGAGCAAATTATAAAGTTACTTGGTGATGGAGAATCTAGTATTAAATCCCTAATCAATGTAATTGATGAAAGAGTCGAGAGGTTTGGTCTGAGTACTGTACCAAATTTGACCCCTCAAAGAGATGCAGAACTAGAAGAGAATGAATGTTGTGATGTGCATACAAGACCTCAAGCTAAACCTGTCTCAGAGTTGAAGGGGACTAGTCCTAGCACTCTGTCAGCAGATGCTGGTTTACAAAGTGACGCATCTGATGCTTTAGCAATGGCATTGCAAGAGAAGGTTTCTGCATTATTGCTTTTATCACAGCAAGAAGAAAGACATCTATTGGAGACAAACGTGAATTCAGCCCTTCAAAGTAAAGCTGAAGAACTTCAGAGGAACTTGTTGCAGGTTACCAATGAAAAGGTGAAAGCCCTCATGGAATTGGCACAATTAAAGCAGGAGCATCAATTACTTCTAGAAAAATTGGGTCATGAAACTAAACAAGTGAAAGATGCAGTCAGCACTGGAGAAAGAAAGCTTGGAACTCGGGAAAGAGACGGAACTTTAAAGAACTTACTGAAGAAATCATATTTGAGACGATGGATTGGACCGTTGGATGTTAGTGCAAATGAAGTGGACAGTAGCTCAAACAATGAAGGGAAATTCTTCAATCATCAATCTAGCAGTATGGATTTTGCAAGTTTCCTCATGTTTATCAGAATGAAGATTGAAAATGCAACTCTTAAGGAAAGCATGGAAAGCATAGAGCATTTAACTTCATCAATTCATAGGCTTCGACTCTCTCTTTTAAAGGCCAAGGAGTCTGTGACTTCGGAAGGAACAGTTGCCGGTGTTTCAGAAATTGTTAATGACGTAATTCACGAGGCAGAACTTTTAAGGACTGCTCTTGGCAGCTCCTTACCCACCAGTTGGTCGGTTGAGGCAGATATTAGTTACATTGGATATGGTGTGGGCAGTGACACGGAGCATCAGCAATGCAGTGATGAGAAGACGGATACTGTTTCTGCCACAGGGCTCGAAATGGTTGAGCTTTTGATTTTTTCAGCTCAGATTTTGAGGGACTTGCAAACCAAGATGGTTCCTGCCTGA 2388 0.4054 MTVQWLVAHPKFQKNPVYIAGDSYSGIPVPVIVKKVSDGNTAGNLPLINLKGYVLGNPLTDWKHDFNSRIKFAHRVGLLSDELYEETKLDCQGEYVFPHVVFPGCLRKPFAVVGRISGTIPSPHRRFLLSSFSFSISRMAESTSDESLLARIQQLEQERDELRKDIEQLCMQQAGPAYLAVATRMHFQRTAGLEQEIESLKKKLAASSRDNLNLQEELSEAYRIKSQLAELHSAEVSKNMEAEKQVKFFQGCVAAAFAERDQAIIEAEKAKEKEETMSQQINGIDKRVEELTSNCLKLKERNDALQIDQAVHMKQNENLKEVINKFFQIRQHSLKEFEDASWDEKCACLLGDPEEVWSYNDASTSKYISALEDQLERLRSSVDYLQNKLRVGLEIENHLKKRVNVLEKKRISMDKVIENGIADLQHYHSQCREQIIKLLGDGESSIKSLINVIDERVERFGLSTVPNLTPQRDAELEENECCDVHTRPQAKPVSELKGTSPSTLSADAGLQSDASDALAMALQEKVSALLLLSQQEERHLLETNVNSALQSKAEELQRNLLQVTNEKVKALMELAQLKQEHQLLLEKLGHETKQVKDAVSTGERKLGTRERDGTLKNLLKKSYLRRWIGPLDVSANEVDSSSNNEGKFFNHQSSSMDFASFLMFIRMKIENATLKESMESIEHLTSSIHRLRLSLLKAKESVTSEGTVAGVSEIVNDVIHEAELLRTALGSSLPTSWSVEADISYIGYGVGSDTEHQQCSDEKTDTVSATGLEMVELLIFSAQILRDLQTKMVPA 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02036 795 Coils Coil 253 308 - -
Cca06g02036 795 Coils Coil 145 172 - -
Cca06g02036 795 Gene3D alpha/beta hydrolase 1 102 IPR029058 -
Cca06g02036 795 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 142 787 - -
Cca06g02036 795 SUPERFAMILY alpha/beta-Hydrolases 3 95 IPR029058 -
Cca06g02036 795 Coils Coil 546 594 - -
Cca06g02036 795 Coils Coil 368 388 - -
Cca06g02036 795 Pfam Serine carboxypeptidase 4 257 IPR001563 GO:0004185|GO:0006508
Cca06g02036 795 Coils Coil 190 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02036 Cca-Chr6 35617483 35628062 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02036 - - gmx:100775191 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02036 06 35617483 35628062 Cca06g02036 06 35617483 35628062 ECH