Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02030 atggaaaaagagaaaaagaaGTATCTTCTGAAAACGGAGCCGTCGGAGTGGTCGTGGGAGGATCAGGCAGCGAACGGAGGCATAAGCAAGTGGGACGGAGTGAAGAACAAGCAGGCCCAGAAATACATGAAGGCCATGTCCATCGGCGACCTCTGCTTCTTCTACCACTCCGGCCCCAAGGCACGCCGCATCGTCGGTGTTGTTTCCGTCGTCCGGGAGTGGTACGGCGATGCTGTCGACGTCAAGGCTGTCGGAGAGATGAGGAGGCCCGTCGACTTAACGGAGATGAAGCATTTCAAGGATTTCGCTCTCTTGAGGCAGCCTAGGCTCTCTGTTGTCCCTGTTCCCGACCTCATTTGGAACCAAATATGTCATTTGGGTGGCGGTTACGACGGTGACGATACCTCCTCTCCATCACTCTGCTCCAATgaaataggaaTGGCGAATCAATTGGGAAATCTTGTGGAATCCATAAAATCAAAGGTTGGGTTCCTGAAGAAGACAAAGAAGGCGTATCTGAAGATGGACAAGAGTGCGAGCGTGAAAGTGGAGATTCGCAGCAGAAAAGCTCGCAAACTTATTGACAAGACTTTGAAGGCTGCTGATACTCCCGCCAACCGCACCCTCTCCTAG 633 0.5055 MEKEKKKYLLKTEPSEWSWEDQAANGGISKWDGVKNKQAQKYMKAMSIGDLCFFYHSGPKARRIVGVVSVVREWYGDAVDVKAVGEMRRPVDLTEMKHFKDFALLRQPRLSVVPVPDLIWNQICHLGGGYDGDDTSSPSLCSNEIGMANQLGNLVESIKSKVGFLKKTKKAYLKMDKSASVKVEIRSRKARKLIDKTLKAADTPANRTLS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02030 210 Gene3D ph1033 like domains 5 137 - -
Cca06g02030 210 Pfam EVE domain 8 125 IPR002740 -
Cca06g02030 210 SUPERFAMILY PUA domain-like 6 128 IPR015947 -
Cca06g02030 210 PANTHER THYMOCYTE NUCLEAR PROTEIN 1 78 133 - -
Cca06g02030 210 PANTHER THYMOCYTE NUCLEAR PROTEIN 1 3 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02030 - - gmx:100817972 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02030 06 35546023 35553355 Cca06g02030 06 35546023 35553355 ECH