Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02027 ATGGATACTTCCGAGCCACAGTCTTCAAAACAGCTAAAAGAACACCTCCAGCACCACCAAGAGCCTTTTTCATTGCAAAGTTACCTTGCTGAAAGAAGTTACATGTTCGAGAACTTCAACTTTGGTAGTAGCAACATCAATTCGGCCAAGAATCTAAAGTGGTCGATCAAATATGATATACACAAGATAAGGAAAAGATTATTACATGCTACGGGGATGCTAAGATCACTGTTATACAAGTTCATTCCCACAGATGACAACCACGAGTTCTCAAACTGGGATGAAGAGCACATCAGTGATCTATATTATGTGCATGAATTAACAGCAGTCTCCCAGACAACTCAACAAACAAATTTAGCTGTGTCCGGTCATTTTACTAACAATGATGTTCAGGACAAGGTTTTGCCAGCGAACATGATGTTTCAGACATTCACACTCCCCAAATTGAGAAGATCTGAGGTCGATGCAGGAACTAAACCATTTTGGATAAGCTCAAAAGATAGCAGAGGATTAGAATGGAAAGAACCATTACCCAGTGCAGTGTGTCACTTAAAAAGTCCAGAAGGTGAGGTAGCACTACCTGTTCCTACTTTGTCCCAGAAACTTGTTAGAGATTATGTAAGAAAGTTACTAGCGAACTCAAATATTCTGAAATTTAGACGTGCAAGAAAAGACAAACTAGAGGACATGGTTGAGACAGCTTCTTTATGCCAAAGAAACAGAAGCAGTCTGCCAAAGAGGAAGCAGCGATGGTTTGACTATGTTGAAAAAGACAGAGTTTTTCATGAACATGGAGGTAAAAGTGTATCAAATAAAGCAGTTTCAGAATCAGAAGATTTTCAGAGTATGATACATGAGCATTTTAGCTTCTTGGAGAAACAATATATAGAAGTTAAAAAGATGAAGCACCTGTTGTATGCAGAATCGTGTGTGATATCAGAAGAGTGGAAAAGCTTCCAAATCAATAATTGGAGAAGAGGGTGTCCCACAGAATCGAAAGGGCAGACGGCGTGCGAGAAGAAGCGATGTGTGGGGTCCTTCTTCCACTTTCCAGTTTTAACTGTTAACTTCTGGAATGCACTTCCGATGCCACCCATCACAAGGTGCAGGTCCTCCATCAAAGATGACCAACAGACTGACTCCTCTTCCACCCAACAGGAAGTGGACTGGAAGAGCGACGAGGAGTTTAAGAAGTTCATGGGAAACCCTTCCATCGAAGCCGCCATAAAGCTCGAGAAGAAGAGGGCTGATAGAAAGCTCAAGCAGCTTGACAGGGAAACCTCCACCACTAACCCTATTTTGGCCCTCTTCAACACCTTAACGCGTGACAACTTGCTCAGAGAAAAGGAGAGGCTGCAAAAGGCTGAGCAAACTTTCAAGGCTCTTGATCTCAACCAGTTGAAGAGTTGCTTTGGCTTTGACACCTTCTTCGCCACCGATGTTCGAAGATTCGGAGATGGAGGCATTTTCATTGGCAATTTGAGGAAGCCCATCGATGAGGCCATTCCCAAGTTGGAGAACAAGCTCTCTGATGCAGCAGGACGAGAGGTCGTAGTGTGGTTCATGGAAGAAAAAACAAATGACATTACCAAACAGGCTTGTGTGGTGCAACCCAAAGCAGAAATAGATCTCCAATTCGAGTCAACTAAGCTCAGTACTCCTTTGGGCTATTTTAGTGCAATTGCATTAGCTGTTACTACCTTTGGAACAGTTGCTTTGATGAGTGGCTTCTTCCTTAAACCCAATGCCACATTTGATGACTATCTGGCTGATGTTGTGCCTCTATTTGGTGGCTTCTTATTTATTCTGGGAGTGTCTGAGATAGCCACCAGGGTAACAGCAGCCCGGTATGGTGTTAAGCTCAGCCCTTCTTTCCTGGTGCCATCTAATTGGACAGGGTGCTTAGGAGTGATGAATAATTATGAGTCTCTCCTCCCAAACAAGAAAGCTCTTTTTGATATTCCTGTAGCACGTACTGCTAGTGCATATCTAACTTCACTATTGCTAGCTGTTGCTGCATTTGTAGCTGATGGAAGCTTTAATGGGGGTGATAATGCATTGTATATACGGCCCCAATTTTTCTATAACAACCCCTTGCTTTCTTTCATCCAATTAGTTATTGGACCTTACGCAGATGATCTTGGAAATGTATTGCCTTATGCTGTGGAAGGTGTTGGAGTTCCTGTTGATCCGCTTGCATTTGCTGGGCTTTTAGGGATGGTGGTGACTTCTTTGAACTTGTTGCCGTGTGGGAGACTAGAAGGAGGGCGCATTGCTCAAGCCATGTTGGGGAGAAGTACTGCCACGCTCTTATCCTTTGCCACTTCATTATTGCTCGGTGTTGGTGGCCTCAGTGGCAGTGTTCTGTGCCTGGCATGGGGATTGTTCGCAACCTTTTTTCGGGGCGGAGAAGAAATACCGGCAAAAGACGAGATCACCCCTGTAGGTGAAAGCAGATATGCTTGGGGCATCATCCTTGGTCTCATCTGTTTTCTCACACTTTTCCCTAATGGTGGAGGCACATTCTCCAGTTCATTCCTCAGTGGTCCATTTTTCAGGGGTGAAATGTAA 2571 0.4384 MDTSEPQSSKQLKEHLQHHQEPFSLQSYLAERSYMFENFNFGSSNINSAKNLKWSIKYDIHKIRKRLLHATGMLRSLLYKFIPTDDNHEFSNWDEEHISDLYYVHELTAVSQTTQQTNLAVSGHFTNNDVQDKVLPANMMFQTFTLPKLRRSEVDAGTKPFWISSKDSRGLEWKEPLPSAVCHLKSPEGEVALPVPTLSQKLVRDYVRKLLANSNILKFRRARKDKLEDMVETASLCQRNRSSLPKRKQRWFDYVEKDRVFHEHGGKSVSNKAVSESEDFQSMIHEHFSFLEKQYIEVKKMKHLLYAESCVISEEWKSFQINNWRRGCPTESKGQTACEKKRCVGSFFHFPVLTVNFWNALPMPPITRCRSSIKDDQQTDSSSTQQEVDWKSDEEFKKFMGNPSIEAAIKLEKKRADRKLKQLDRETSTTNPILALFNTLTRDNLLREKERLQKAEQTFKALDLNQLKSCFGFDTFFATDVRRFGDGGIFIGNLRKPIDEAIPKLENKLSDAAGREVVVWFMEEKTNDITKQACVVQPKAEIDLQFESTKLSTPLGYFSAIALAVTTFGTVALMSGFFLKPNATFDDYLADVVPLFGGFLFILGVSEIATRVTAARYGVKLSPSFLVPSNWTGCLGVMNNYESLLPNKKALFDIPVARTASAYLTSLLLAVAAFVADGSFNGGDNALYIRPQFFYNNPLLSFIQLVIGPYADDLGNVLPYAVEGVGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQAMLGRSTATLLSFATSLLLGVGGLSGSVLCLAWGLFATFFRGGEEIPAKDEITPVGESRYAWGIILGLICFLTLFPNGGGTFSSSFLSGPFFRGEM 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02027 856 Coils Coil 442 465 - -
Cca06g02027 856 PANTHER ZINC METALLOPROTEASE EGY1 368 854 IPR044838 -
Cca06g02027 856 Coils Coil 406 426 - -
Cca06g02027 856 MobiDBLite consensus disorder prediction 370 389 - -
Cca06g02027 856 CDD S2P-M50_like_2 561 775 - -
Cca06g02027 856 PANTHER ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED 368 854 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02027 K25380 - gmx:100818502 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02027 06 35516001 35522879 Cca06g02027 06 35516001 35522879 ECH