Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02023 ATGGATCCGTGCCCTTTCGTGCGGATCCTCGTCGGAAACCTCGCCGTCAAATCGCCGGCGTCGTCCAAGGCCTCATCCTACTCAGGGAAGGTGCACCCATCGAGTTCGCCCTTCTTCTGCAGGATAAAGCTAAAGGGGGTGGCTTCGGATACGGCCAGATGCCACGTGGCCACACTGCCTCTCATATCAGAAAGGGACCCAAACCCTCACTCCCTCGCCGCCTCCTTCGATTTCTCCAAACCCCAAATCATGAAAGCCTCAAAGAAAGCGCACATAAAGATCTCCGTCTACAAGGGGCCCACCACGCCCACCTGCTTCTTCACTTCGGCTAAACTAATGGGCTGCATCACCATACCGCTGGACCTCGCCTCGGCCCAGTCGCGGCCCTGCACCATCCACAACGGGTGGGCCAGCCTTTCCAAGGCCCAGCTCTTGCATTTGACAGTGCGGGCGGAGCCAGACCCTCGCTTTGTCTTTCGCTTCGACGGGGAGCCCGAATGCAGCCCGCAGGTATTTCAAGTGAAAGGCCACGTCAAGCAACCGGTTTTCACTTGCAAGTTCAGCTTCAGGGACAAGAACCCGGTTCAATTCCCTACCCTCAACGCCAACCGGAAAGGCTGGTCCATCACCGTGCACGACCTTTCCGGCTCGCCGGTGGCCGCCGCCTCCATGGTCACGCCCTTTGTACCCTCGCCGGGATCGCAGCGGGTCAGCCGCTCCAACCCGGGGGCCTGGCTCATCATCCGCCCCGACGGAGACGGCACGTGGAAGCCCTGGGGCCGCCTCGAGGCCTGGCGCGAGCCCAACCACTCCAATGCCGCCGTCGGTTACCGCTTCGAAGTCCTCCCCGCCACCGCCGACCCCGTCACGCTCGCCGCCTCCACCCTAAGCTCACAGCGCGGCGGGAAATTCACCATTGACGCCACCTCCGGCGTCACTCCGGCGAACACCCCGAACGGAAGCTGGGATTTGGGGTCCGGGTCCATGTCAAGTTCGGATTTTGGGTTTGAGTCGCAATTCTTTTACAAGGGTTTTGTGATGTCGGCGACGGTGAACGGAGAAGGAAAGTGTAGCAAACCGGAAGTGGAGGTTGGGGTGCAGCACGTGACTTGCACGGAGGATGCTGCGGCGTTCGTTGCTCTCGCCGCGGCCTTGGATTTGAGCATCGACGCTTGCAAGTTGTTCTCTCAGAAACTCCGAAAGGAGTTGCGGCAGTAG 1218 0.6067 MDPCPFVRILVGNLAVKSPASSKASSYSGKVHPSSSPFFCRIKLKGVASDTARCHVATLPLISERDPNPHSLAASFDFSKPQIMKASKKAHIKISVYKGPTTPTCFFTSAKLMGCITIPLDLASAQSRPCTIHNGWASLSKAQLLHLTVRAEPDPRFVFRFDGEPECSPQVFQVKGHVKQPVFTCKFSFRDKNPVQFPTLNANRKGWSITVHDLSGSPVAAASMVTPFVPSPGSQRVSRSNPGAWLIIRPDGDGTWKPWGRLEAWREPNHSNAAVGYRFEVLPATADPVTLAASTLSSQRGGKFTIDATSGVTPANTPNGSWDLGSGSMSSSDFGFESQFFYKGFVMSATVNGEGKCSKPEVEVGVQHVTCTEDAAAFVALAAALDLSIDACKLFSQKLRKELRQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02023 405 PANTHER F2J10.8 PROTEIN 1 193 - -
Cca06g02023 405 PANTHER F2J10.8 PROTEIN 202 405 - -
Cca06g02023 405 PANTHER OS08G0163500 PROTEIN 1 193 IPR010410 -
Cca06g02023 405 PANTHER OS08G0163500 PROTEIN 202 405 IPR010410 -
Cca06g02023 405 Pfam Protein of unknown function (DUF1005) 1 404 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02023 Cca-Chr6 35461595 35463406 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02023 - - gmx:100816033 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02023 06 35461595 35463406 Cca06g02023 06 35461595 35463406 ECH