Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01868 atgaagagTAGTTTTGTGTGTCTTATCATATGTTCCGCATTGGTAGAGTCACGAGCATTGTTGCAACCTTCAGCTGCACCCTCTCCTCTCCCTCTTGCGCCGGCCTTGTTCGTCATCGGAGACTCCTCCGTCGATTGCGGAACCAACAACTATCTTGCCACCTTTGCGCGCGCTGATCACATTCCTTACGGAAGAGATTTCGACACTCACCGACCCACCGGAAGGTTCTCCAACGGAAGAATCCCCGTCGATTTTCTTGCTCTGCGTCTTGGGCTTCCATTTGTGCCCAGTTATCTTGGGCAGACAGGGGCCGTGGAGGATATGATTAAAGGGGTCAATTACGCTTCTGCTGGCGCCGGCATTATTCTATCTAGCGGCTCTGAATTGGGTCAGCATATCTCCCTCACTCAGCAAATTCAGCAATTTACAGACACGTTTCAGCAGTTTATATTGACCATGGGAGAGGATGCTGCCAACACTCTCATATCCAATTCCATCTTTTATATTTCTATTGGAATTAACGACTACATTCATTACTATTTGCTCAATGTATCCAACGTCGATAATTTGTACCTACCGTGGCATTTCAATCACTTTTTAGCATCTTCATTGAGGCAAGAGATTAAGAACTTGTACAATGTAAATGTTAGGAAAGTGGTGATCACGGGACTTGCCCCTATTGGCTGTGCACCTCACTACCTGTGGCAGTACGGTAGTCAAAATGGAGAATGTGTTGAGCAGATAAATGACATGGCCGTCGAATTTAACTTTCTCACGAGGTACATGGTTGAAAATCTTGCTGCGGAGCTCCCGGATGCCACTATCATCTTCTGTGATGTGTTTGAAGGTTCCATGGATATTTTAAAGAATCATGAACGTTATGGTTTTAATGTCACGAGTGACGCCTGCTGTGGATTTGGGAAGTACAAGGGCTGGATCATGTGCTTGTCACCGGAAATGGCATGCAGTAATGCCTCCAACCATATCTGGTGGGACCAGTTTCATCCAACTGATGCGGTGAATGCCATTCTGGCAGACAATATATGGAATGGCCAGCACGCTGAAATGTGCTATCCTATGAACTTGGAGAACATGGTAATTCAGATGCCAAAATGA 1116 0.4561 MKSSFVCLIICSALVESRALLQPSAAPSPLPLAPALFVIGDSSVDCGTNNYLATFARADHIPYGRDFDTHRPTGRFSNGRIPVDFLALRLGLPFVPSYLGQTGAVEDMIKGVNYASAGAGIILSSGSELGQHISLTQQIQQFTDTFQQFILTMGEDAANTLISNSIFYISIGINDYIHYYLLNVSNVDNLYLPWHFNHFLASSLRQEIKNLYNVNVRKVVITGLAPIGCAPHYLWQYGSQNGECVEQINDMAVEFNFLTRYMVENLAAELPDATIIFCDVFEGSMDILKNHERYGFNVTSDACCGFGKYKGWIMCLSPEMACSNASNHIWWDQFHPTDAVNAILADNIWNGQHAEMCYPMNLENMVIQMPK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01868 371 Gene3D SGNH hydrolase 32 355 IPR036514 -
Cca06g01868 371 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 26 367 - -
Cca06g01868 371 CDD SGNH_plant_lipase_like 34 351 IPR035669 -
Cca06g01868 371 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Cca06g01868 371 SUPERFAMILY SGNH hydrolase 107 350 - -
Cca06g01868 371 PANTHER OS02G0290900 PROTEIN 26 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01868 Cca-Chr6 34089451 34091292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01868 17 366 Acyl Lipid Metabolism Gene Families AT4G10950 70.286 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01868 - - pvu:PHAVU_002G165200g 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01868 06 34089451 34091292 Cca06g01868 06 34089451 34091292 ECH