Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01865 ATGGCCTCTGAGAGGGAGTGTTTTGACCTCTCTGGACCCTTACATCTAACTTATGTTGACTGGGATAATGCACATCATCGAATGTCAGTTGCTGCTAGTTTGGTCCAAGGTGTTTATGTTCTGGCGAAGGACAGGCAGGAACGACGCCAAGGTCCCAATGCTCTTGCATCGCCTTGGTGGGCATTCTTCCACTTTCAGTTGCTCCGTACGCTTGTTGACGATGTTGATTCTTCCATCTTTGGTGCAATTTATGAGTTCAAGCCTCCATCATCAATGTGCAATGACACCTTACATAGAAGTCCACGTTATGTAATTGCCTTCAGAGGGACTATAACCAGGGGAGACTCGGTTTCCCGTGATATTGAGCTGGATATCCACTTAGTCCGAAATGGACTTCATCAAACTTCACGTTCTGAGATAGCTATCCAAGCTGTTCGGAACATGGTGGCTGCTGCAGGTGGTTCCAATATCTGGTTAGCTGGCCACTCACTGGGATCAGCAATGGCAATGCTCGCTGGGAAAACCATGGCCAAGAATGGTATATTTATTGAGTCTTTTCTTTTCAACCCTCCTTATGTGTCTGCACCAATTGAGAGAATCAAAGATAAGAAATTGAAACACGGGCTTCGATTCGCTGGCAGTGTAGTAACAGCTGGACTTGCCATTGCTATGAAGGCTAAGCAGAAGAAGAGTTTGTCCTTTGATCCATTTGCTGCCTTGTCTGCCTGGGTGCCATGCTTGTTTGTGAATCCTTCTGACCATATCTGCTCCGAGTATGTTGGATACTTTGAACACAGAAGAAAAATGGAAGAGATGGGTGCAGGAAACATTGAAAAGTTGGCAACTCAAACTTCCCTTGGTTGTCTAGTGATGGGTGTGTTGGGGAAGGAATCTGATGAACCCTTGCACCTCCTTCCTTCGGCTTCTCTGACTGTCAATCATACTCCTTCACGGGATTTCAAAGATGCTCATGGGATTCACCAGTGGTGGAAACCTGACTTACGCCTGGAATCCAAGCTCTACAAATACTAA 1032 0.4603 MASERECFDLSGPLHLTYVDWDNAHHRMSVAASLVQGVYVLAKDRQERRQGPNALASPWWAFFHFQLLRTLVDDVDSSIFGAIYEFKPPSSMCNDTLHRSPRYVIAFRGTITRGDSVSRDIELDIHLVRNGLHQTSRSEIAIQAVRNMVAAAGGSNIWLAGHSLGSAMAMLAGKTMAKNGIFIESFLFNPPYVSAPIERIKDKKLKHGLRFAGSVVTAGLAIAMKAKQKKSLSFDPFAALSAWVPCLFVNPSDHICSEYVGYFEHRRKMEEMGAGNIEKLATQTSLGCLVMGVLGKESDEPLHLLPSASLTVNHTPSRDFKDAHGIHQWWKPDLRLESKLYKY 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01865 343 PANTHER LIPASE CLASS 3-LIKE 2 343 - -
Cca06g01865 343 Pfam Lipase (class 3) 141 181 IPR002921 GO:0006629
Cca06g01865 343 Gene3D alpha/beta hydrolase 58 207 IPR029058 -
Cca06g01865 343 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 343 - -
Cca06g01865 343 SUPERFAMILY alpha/beta-Hydrolases 36 196 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01865 Cca-Chr6 34080593 34082930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01865 1 276 Acyl Lipid Metabolism Gene Families AT2G05260 57.491 7.21e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01865 - - gmx:100786952 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01865 06 34080593 34082930 Cca06g01865 06 34080593 34082930 ECH
Cca06g01865 06 34080593 34082930 Cca09g02520 09 50715658 50717699 PCT