Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01847 ATGTCTCAAACGACAAACAACCTAGTCTCTATGGAGAAACTCACACTGATAGAGGAAAAGCATAACCAACTTTTAGCGACAAAATCATATCGTAGTAACTTGTGGGATTGTGGGAGCACGCTCTACGACTCGTTCGAGCTCAACTCCTTCAAACGCCAACTCGACTCAGCCATAGCTAACTCCGCTAGAACCCTTTCCATGCCTCGTTTAGCTGAACACCCACTTCACGCGCCGCCGAAGCAACCGCCACCTTCGGTGGTCGTGTCACGGAAGTCCTTCAACTTCTCTCGGTCATTTCAGAAACTTGTTCGCTCCGTTTTCAAGTCCAACAATAAATCCACCAGCGTTGGTTTCCAAGTGGCGGAGAAATACTCGAGAGAGCGTTTGTACGTGGTTTATGATAAGTCTGGATCGGTTCTCTCCACCATACCCGAACTTCCGGAATTTGAAATCGGTGCGCTTTCGCCGGAGATCTCTTCCTTGGTTAGAAGGTCTGCTTCCGAGCGCTTCACTCCCACTGCAGTAGGTGTTTCGTGCGCTTAA 543 0.4917 MSQTTNNLVSMEKLTLIEEKHNQLLATKSYRSNLWDCGSTLYDSFELNSFKRQLDSAIANSARTLSMPRLAEHPLHAPPKQPPPSVVVSRKSFNFSRSFQKLVRSVFKSNNKSTSVGFQVAEKYSRERLYVVYDKSGSVLSTIPELPEFEIGALSPEISSLVRRSASERFTPTAVGVSCA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01847 180 PANTHER SERINE/THREONINE-KINASE 28 180 - -
Cca06g01847 180 PANTHER PLANT/K16L22-9 PROTEIN 28 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01847 Cca-Chr6 33877826 33879139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01847 - - gmx:100777768 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01847 06 33877826 33879139 Cca06g01847 06 33877826 33879139 ECH
Cca06g01847 06 33877826 33879139 Cca09g02501 09 50544748 50545847 PCT