Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01835 ATGGAGGAATCCCGCACAGATGATGTTGGTAGAGAGTGTAACTTTGCGTTCGCATTTAACAACATCAATTTCTCAGACCGAATTCTGAACCTTGAGGTTATACCCGACCCATGCCCTCAATCCCATTCTCTCTCTCCCAATCGCAAGAGACGGAGACACTCTCTTACCAAAGGTGATGAAATTTCGCACGACAGTGATGATTCATCATTGGGCATTAGTTGCTCAAACGTTCTAAGAATTAGGACCGTACATATAAGTTCTTCAATTCTTGCAGCAAAAAGTCCCTTCTTTTATAAATTGTTTTCAAATGTGACGAGAGAGTCTAAGCAACAAAATGTGACTCTTCAAATCCATGATTCTGAAGAGGGCGCGGTTATGGACATACTTAATTTTATGTATGGTAATACTTTATCAAGAACCACGTCTGCTGCTGTATTGGATGTGCTGGTGGCCGCTGATAAATTTGAGGTAACCTCGTGCATGAAGTACTGCAGTAGGATATTGAGGCAAATGCCTATGACTTGTGAATCTGCTTTACAATTTTTGGATCTTCCTTCAAGCATTCTGACGGCAAATGCAATTCAACCACTGATAGAGACAGCAAAGTTGTTTCTTGCCACACACTACAGAGACATAACAAAGTTTGCAGATGAAGTGCTGAATTTGCCCTTGGTTGGCATTGAAGCGGTGCTATCTAGTGATAACCTCCTGATACCTTCAGAGAATTGTGTCTATAACTTTGTGCTCAAGTGGGCTAGGAGACATTATCCAAAAATTGAGGACCGACAACAAGTCCTTGGATCACGCCTTGGTGGACTCATTCGTTTTCCATACATGGGCTGCCAAAAACTGAAGAAGGTCTTGACATGCGAAGACTTCCCTCCAGACTTTGCATCAAAGGTCGTTCTTGAAGCTCTTTTCTTTAAGACAGAGACACCATATAGACAATGGTCTCTTGCTGCTCAGGATGTTGACACTACCTGCTGTCGTTTTGTGGAGCGGACTTACACGTATCGTCCTGTGAAGGTGGTTGAATTTGCATTGCCCCGTCCGCGGTGTGTTGTATACCTTGATCTAAAGAAAGAAGAATGTGTTCGTTTATTTCCTAATGCTCGAATTTACTCTCAGGAATTCTCCCTAGGAAAGCAGGGGTTTCTCTTGTCACCTCGGTGCTATGAGGACCGGCAAAACTCATCCCATTGCTTTGGACTTTTTTTAGTAATGCAATTCAAGCAATCAGTATCTCTTCATGTTGAATATGAGTTTTTTGCTAGATCAAAATTCACTTTGGAGTATTTAACCAGGTGCAAAGGAAATTATACTCTCACGGCAGGCAAGTCTGTGGGGCATAGGAACCTGTTTGGTATACCATGGACTGAATTTATAGCTGACAATAGTCATCACTTCATCAACGGATTACTTCATCTAAAAGTTGAACTTACTGTTAGGCAATGA 1455 0.4192 MEESRTDDVGRECNFAFAFNNINFSDRILNLEVIPDPCPQSHSLSPNRKRRRHSLTKGDEISHDSDDSSLGISCSNVLRIRTVHISSSILAAKSPFFYKLFSNVTRESKQQNVTLQIHDSEEGAVMDILNFMYGNTLSRTTSAAVLDVLVAADKFEVTSCMKYCSRILRQMPMTCESALQFLDLPSSILTANAIQPLIETAKLFLATHYRDITKFADEVLNLPLVGIEAVLSSDNLLIPSENCVYNFVLKWARRHYPKIEDRQQVLGSRLGGLIRFPYMGCQKLKKVLTCEDFPPDFASKVVLEALFFKTETPYRQWSLAAQDVDTTCCRFVERTYTYRPVKVVEFALPRPRCVVYLDLKKEECVRLFPNARIYSQEFSLGKQGFLLSPRCYEDRQNSSHCFGLFLVMQFKQSVSLHVEYEFFARSKFTLEYLTRCKGNYTLTAGKSVGHRNLFGIPWTEFIADNSHHFINGLLHLKVELTVRQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01835 484 MobiDBLite consensus disorder prediction 39 69 - -
Cca06g01835 484 SMART BTB_4 74 172 IPR000210 GO:0005515
Cca06g01835 484 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 8 57 - -
Cca06g01835 484 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 57 484 - -
Cca06g01835 484 Pfam BTB And C-terminal Kelch 195 287 IPR011705 -
Cca06g01835 484 Pfam BTB/POZ domain 81 170 IPR000210 GO:0005515
Cca06g01835 484 SUPERFAMILY POZ domain 82 169 IPR011333 -
Cca06g01835 484 PANTHER OS02G0260700 PROTEIN 57 484 IPR045890 -
Cca06g01835 484 PANTHER OS02G0260700 PROTEIN 8 57 IPR045890 -
Cca06g01835 484 Gene3D - 204 309 - -
Cca06g01835 484 CDD BTB_POZ_ZBTB_KLHL-like 81 155 - -
Cca06g01835 484 Gene3D Potassium Channel Kv1.1; Chain A 65 191 IPR011333 -
Cca06g01835 484 ProSiteProfiles BTB domain profile. 66 141 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01835 Cca-Chr6 33749091 33752549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01835 - - ccaj:109789984 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01835 06 33749091 33752549 Cca06g01835 06 33749091 33752549 ECH