Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01833 ATGAAAAGAGAAAAGGTGGATGAGAGAGGCATAAATAAGATGAAAAGGGAAGCGGAAAAGGAGGAAAAATTGGGAGAAAAGTTAAGGCGAGGGGTATTGGTAGGGAAAAGCAAGGCCCCGTGCACTCCAGTGTTTTACGCACATCAATTCCATTCTCTCTCTGCTAGAAACCTCGCCGCGGCTCTCTGGGAATTCAACCAACTCTTTCAAATGCATCGTCCTGCCAATAACGCCGCCGATCCGACCCTCCGCCGCCGCCATTACATCCTCCATAGGGACAAGGCTCCGGACACCTCCAACTTCCTTGCTGATGCTTCTCCCACTTCCCTTGATCAGCCAGCCAGTGCGAGCAGTTTGAGGAGGCATGTTGCAGCAACTCTAATGCAGCATCATCGGGCAAATGAGAGAAATAACCATGCACTACAACCTTTATCTCCTGCGAGTTACGGTAGTTCCATGGAGATGACACCTTATAATCCTGCAGCCACTCCTACTAGTTCCTTGGAATTTAAGGGAAGGATTGGGGAGCCGCATTATAGTCTCAAAACATCTACTGAACTCCTAAAAGTGCTAAACAGAATATGGAGCTTGGAAGAACAACATGCTTCCAACATTTCACTGATAAAAGCATTAAAATCAGAGCTAGATCATGCTCGTTTCCGGATCAAAGAGTTGCTTCGAGATAGACAAGCAGATCGACATGAGATCGATGACCTGATGAAGCAAATTGCAGAGGATAAATTGGTTCGGAAGAGTAAGGAGCAGGATCGACTCCATGCTGCTGTTCAATCTGTGAGGAATGAACTTGAGGATGAGAGGAAATTAAGAAAACGGTCAGAGAGCATACACAGGAAGCTAGCTCGGGATTTTTCTGAGTTGAAGTCCTCTCTGACTAGCGCTCTAAAAGAATTGGATCAAGAGAGAACAAGAAGAAAACTATTAGAGAACCTCTGTGATGAATTTGCCAGGGGAATAAATGAATATGAACAAGAGGTGCATACTCTGAAACACAAGTCCGATAAGGATTGGGTTCAAAGGGCTGATCACGATCGATTGATCCTCCACATATCTGAATCATGGCTGGACGAACGTATGCAAATGCAGCTGGAAGCAGCTCAGAATGGATTTCTGGATAAGTCCATAGTCGATAAACTAAGCCTTGAAATAGAGACATTCCTTAAAGCTAAACAAAATAGTAGGAGTACAGAAAATATAGCTGTAAGAAATCGCCGTAATTCCTTGGAATCTGTTCCACTGAATGATGCTGTCAGTGCACCTCAAGAGGTGGGTGATGATGATGATTCTGTGGGTAGTGATTCAAATTGTTTTGAGTTGAACAAGCCAAATAACAAGGGATCTAAGGTACATGAAGAAGAGCCTGATGACAAAAATTTTGAGGAGACATTGAAAACCAACCACACAAAGAAAAAACCAGTACCACGAGAAGGGTTAAAACATCGTAGCCCTTCTAGCCTGCAAGTGAAGTTTGAAGAGCAGATAGCATGGGCCATGTCATCTGATTCACATAAGAAGTCCCAGTCAATTGATGCAGAGCAGGGTAAGACCACAAATACTAGGCTTGTTGAAGGGACTATATCTGAAAAGTCTGAACACTTTGAGATTAACGAAAATGATGGTTCTGAGAGAAAAAATAACCCCAGTGAATTGCACAGCTCCAATAAAAATCACATTATTGATAATCTCATAAGAGGTCAACTTTTGGCATCAGAAGGTGGCAATATGCATGCTGAAAATAATTACGGTGAGGCTTCCTGCAGCAATGCTGGGTGGAGGAATCAAGCAAGCCCTGTGAAGCAGTGGATGGCAAAACTCGCATCCCAAGACCTTGACATATCGGAGGCTTCTAAAGTGCCTTCAGGATCAAAGGAGAGTAATACTTTGAAAGCGAAGCTTCTTGAAGCTAGGTCCAAGGGGCAGAGATCGCGATTAAAAGCCTTGAAAGGGTCCTTTTAG 1974 0.4382 MKREKVDERGINKMKREAEKEEKLGEKLRRGVLVGKSKAPCTPVFYAHQFHSLSARNLAAALWEFNQLFQMHRPANNAADPTLRRRHYILHRDKAPDTSNFLADASPTSLDQPASASSLRRHVAATLMQHHRANERNNHALQPLSPASYGSSMEMTPYNPAATPTSSLEFKGRIGEPHYSLKTSTELLKVLNRIWSLEEQHASNISLIKALKSELDHARFRIKELLRDRQADRHEIDDLMKQIAEDKLVRKSKEQDRLHAAVQSVRNELEDERKLRKRSESIHRKLARDFSELKSSLTSALKELDQERTRRKLLENLCDEFARGINEYEQEVHTLKHKSDKDWVQRADHDRLILHISESWLDERMQMQLEAAQNGFLDKSIVDKLSLEIETFLKAKQNSRSTENIAVRNRRNSLESVPLNDAVSAPQEVGDDDDSVGSDSNCFELNKPNNKGSKVHEEEPDDKNFEETLKTNHTKKKPVPREGLKHRSPSSLQVKFEEQIAWAMSSDSHKKSQSIDAEQGKTTNTRLVEGTISEKSEHFEINENDGSERKNNPSELHSSNKNHIIDNLIRGQLLASEGGNMHAENNYGEASCSNAGWRNQASPVKQWMAKLASQDLDISEASKVPSGSKESNTLKAKLLEARSKGQRSRLKALKGSF 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01833 657 Coils Coil 297 331 - -
Cca06g01833 657 PANTHER GB|AAF24581.1 15 656 IPR043424 -
Cca06g01833 657 MobiDBLite consensus disorder prediction 531 556 - -
Cca06g01833 657 Coils Coil 11 31 - -
Cca06g01833 657 Coils Coil 208 242 - -
Cca06g01833 657 MobiDBLite consensus disorder prediction 450 478 - -
Cca06g01833 657 MobiDBLite consensus disorder prediction 619 657 - -
Cca06g01833 657 MobiDBLite consensus disorder prediction 504 561 - -
Cca06g01833 657 MobiDBLite consensus disorder prediction 1 22 - -
Cca06g01833 657 PANTHER INTRACELLULAR PROTEIN TRANSPORTER USO1-LIKE PROTEIN 15 656 - -
Cca06g01833 657 MobiDBLite consensus disorder prediction 619 633 - -
Cca06g01833 657 MobiDBLite consensus disorder prediction 417 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01833 Cca-Chr6 33731177 33735390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01833 - - gmx:100781629 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01833 06 33731177 33735390 Cca06g01833 06 33731177 33735390 ECH