Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01829 ATGAACAATAAAATAGAGAGCATTGAAATTAACATTCCTACATGTGCTCCTACTAAGCCTGAAGTGCATGATACTAACAAGAAATCTGGAGCAATCAAAGGTTGGCTTCAGATTCAGAGTGTATGGGATTTTTGCAAGGAAGACACGGGCAATGAAATATTTGCACTCAAAGTTGGGCTAGCAGTTCTTCTGGTGTCTTTGCTTATATTATTTGAAGCCCCATACCAAGTCTTTGGGCCCAATATCGTATGGGCGATTCTCACTGCTGTCCTTGTCTGCGAGGACAACGTTGGTGCAACATTTAATCGAGGATTTAATCGAGCACTGGGAACCTTGGTGGCGGGAATCTTGGCCATTGCTGTTGCTCAGACAGCGCTGTCCAGTGGCCATGTCGCAGAGCCTTTTATCATTGGCCTTAGTATCTTCATGATTGCGGCCATAACATCATACATGAAAACGTGGCCACCGCTTGTGCAGTATGAGTATGGGTTTAGGGTGGCACTGTTAACGTATTGCTTGATCATAGTTTCAGATTATAGAATGGGTAACCCAATCAGGACTATGATCGATCGGTTGTATTCAATCGCCATTGGAGGAATAATATCAGTGTTGGTCAATGTTTCTGTTTTTCCTAAATGGGCAGGGGACAACCTACATAAAGAACTCGTCAAAAACTTCCATTCAGTGGCAGATTCACTTGAGGAATGCGTTAAGAAATATTTAGAAGATGAGTCAGAGAAGTCTACAATCATCACAACTAGCACAAATGAATTTTCAAACGAACCGACTTATAAGAGATGTCAAAATATCTTAAATTCAGGATCAAAGCTTGAGACTCTGGCTAAATCAGCAAAATGGGAACCACCACATGGTAGATTCATGCACTTTTCATATCCATGGTCACAATATGTGAAAGTTGGGGTGGTCTTACAATACTGTGCTTATGAAGTTGTGGCACTCCAAAGCATTGTACATGCAGAAATTCAGGTACCCTACAAATTGCGGGTTGTGTTCCAATCAGAAATCCAAGAGGCATTAAACGAGGCTGCAGAACTGGTAAGGATTTTGGGAAGAGACATTAGTTGTATGAAGTGGAGTCCGAAAAACTCCCACATTAAGAGGCTTCATAGCTCTACTAAGAGGCTACAACGTTCCATGTACTTGCAATATTATTATATACTCACATCTACTTTTGAAATTGATAACCCATCAAAGTCCTTTGCACACACCTACCATTTACCAGATCAGAGGGAGGTGGTAGAACAACTAGAATGTTACCATGAGATAACAAGGAAGCAATTGAAAAGACTATATTCTTGGCCATCTAGAGAGGTGGATGCATTTGAAGAAGATGGTGAGAAAAGCATAAAGATAGTGGATTCCTTAGAGAGTACTGCAATATTGTCATTGGCTAACTTCACTTCCTCGCTGGTTGAGTTTGTGGCAAGAGTTGACCATTTGATAGAGGCAGTGGATAAGCTTTCCACCATGGCCAAGTTCAAGCCAGCGGATGGGTTGTAG 1521 0.4155 MNNKIESIEINIPTCAPTKPEVHDTNKKSGAIKGWLQIQSVWDFCKEDTGNEIFALKVGLAVLLVSLLILFEAPYQVFGPNIVWAILTAVLVCEDNVGATFNRGFNRALGTLVAGILAIAVAQTALSSGHVAEPFIIGLSIFMIAAITSYMKTWPPLVQYEYGFRVALLTYCLIIVSDYRMGNPIRTMIDRLYSIAIGGIISVLVNVSVFPKWAGDNLHKELVKNFHSVADSLEECVKKYLEDESEKSTIITTSTNEFSNEPTYKRCQNILNSGSKLETLAKSAKWEPPHGRFMHFSYPWSQYVKVGVVLQYCAYEVVALQSIVHAEIQVPYKLRVVFQSEIQEALNEAAELVRILGRDISCMKWSPKNSHIKRLHSSTKRLQRSMYLQYYYILTSTFEIDNPSKSFAHTYHLPDQREVVEQLECYHEITRKQLKRLYSWPSREVDAFEEDGEKSIKIVDSLESTAILSLANFTSSLVEFVARVDHLIEAVDKLSTMAKFKPADGL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01829 506 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 502 - -
Cca06g01829 506 Pfam Aluminium activated malate transporter 42 495 IPR020966 GO:0015743
Cca06g01829 506 PANTHER OS01G0221600 PROTEIN 1 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01829 Cca-Chr6 33700999 33703621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01829 39 501 Miscellaneous Gene Families AT3G18440 36.948 5.69e-92 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01829 - - gmx:102668657 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01829 06 33700999 33703621 Cca06g01829 06 33700999 33703621 ECH