Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01825 ATGAAGAAAAACATGGGAAAGTCGGTGTCTAGTCCAGAAGCACATGCATGCGAGATAACAACGGAGGAATTGATCTCCATGTTCCCATCACGCAAACAAGAAAAACAAAGCAGCAAATGTTTGGTCTACACTTTGGCTTCCTTTGTTACCCTTTTCTTCGTTTGGTTTGTTTTTGCATCCATCGTGTTGCGCGTCCAAGATCCCGATATTGAATTGAAATCAGCCAGGTTGTCGAGGCACAACACTGATCATCATCACTATAATCATTCCTTTGATGTCACCATGATCGCTCGCGTGACCCTTACGAACCCAAATTTCGGTCCTTTCTATAACGGGGACAGTAGAGTGAGTGTGCTCTATGGGGCTTCCACTGTTGGTGCTTCCCAATTATTGGAAGGTGCCACAGTGGAGCCTAGACAAACCAAGGAATTCAATTTCAAGCTACACATGAGGTTCACCAAATCGGCCAATGCAAATCTAACCAATGATATCACTTCAGGCATGCTCAAACTCACAAGCTACGCAAAACTAAGTGGTACGGTGCACGTCCTCAACATCGTAAACAAGAAAAAGACCATACTCATGGCTTGTATTATAAATCTCAACATAACCTCCTACTCCATTCACCATTTCCAATGCTAA 642 0.4346 MKKNMGKSVSSPEAHACEITTEELISMFPSRKQEKQSSKCLVYTLASFVTLFFVWFVFASIVLRVQDPDIELKSARLSRHNTDHHHYNHSFDVTMIARVTLTNPNFGPFYNGDSRVSVLYGASTVGASQLLEGATVEPRQTKEFNFKLHMRFTKSANANLTNDITSGMLKLTSYAKLSGTVHVLNIVNKKKTILMACIINLNITSYSIHHFQC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01825 213 Gene3D - 56 195 - -
Cca06g01825 213 SUPERFAMILY LEA14-like 51 158 - -
Cca06g01825 213 Pfam Late embryogenesis abundant protein 98 191 IPR004864 -
Cca06g01825 213 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 213 - -
Cca06g01825 213 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 23 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01825 Cca-Chr6 33677034 33678695 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01825 - - gmx:102668526 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01825 06 33677034 33678695 Cca06g01825 06 33677034 33678695 ECH