Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01813 ATGAGTAGAGGTGAAAGATCTGGTGGTGGACAAAGCTCCTTGGGCTACCTATTTGGGTCCGAAGAGAAGCCAAATCAGCCTCTTCCCACCACAACAGTTTCTTCATTACCACCCTATGGTATTGACATCGACATCGCCATGCCCCATAACGTTGTTGCTGCTTCTAACACCCAACTTGTTGCCTCAAACAACGGATCTCAAGGCCTGCACTCTGGAAACATTGTAACCAATCGTCCTTCAACAAAAGTAAAATCGGTACCTGGTGGACATTCTTCGCTTGGATACTTGTTTGGAGATAAGTGA 303 0.462 MSRGERSGGGQSSLGYLFGSEEKPNQPLPTTTVSSLPPYGIDIDIAMPHNVVAASNTQLVASNNGSQGLHSGNIVTNRPSTKVKSVPGGHSSLGYLFGDK 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01813 100 MobiDBLite consensus disorder prediction 63 87 - -
Cca06g01813 100 PANTHER SPR1 1 100 IPR039613 GO:0043622
Cca06g01813 100 PANTHER PROTEIN SPIRAL1-LIKE 5 1 100 - -
Cca06g01813 100 MobiDBLite consensus disorder prediction 63 89 - -
Cca06g01813 100 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01813 Cca-Chr6 33543673 33545058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01813 K18635 - gmx:100526947 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01813 06 33543673 33545058 Cca06g01813 06 33543673 33545058 ECH