Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01808 ATGAATTTACCATTACCATTTACCACTGAGCGAATCATAGGCATGGCTGTGGTACCTTTCCCATACTCGGGAACCCCCACTCTTTCATCTCTTCCACTATCTCAACAAAAAGGGCTTAAAACCAATCCAAACACGTCCTCACTAATCCAATGCTGCCACAGCCTAAAAAGTAGCAACGGGCAAGCGAGATTTGAAGAGAAGTTGCATCCTGAAACTGAAGCTGTCCCACCCAGGCCTCGAAGGATAATCCTGGTTAGGCACGGAGAGAGTGAAGGAAACGTGGATGAGAGCGTGTACACCAGAATACCTGATCCCAAGATACCCCTCACTGAAAAGGGCAAGCTCCAATCACAAGAATGTGGCCACAGAATCAAGAAAATGATTCAGAAAGATGCTCACCAACACTGGCAGGTTTACTTCTACGTATCGCCCTATAGAAGGACCCTTCAGACCTTGCAGAACCTCGCTCGTCCCTTCCAACGCTCCAGAATCGCTGGATTCAGAGAGGAGCCTCGTATTCGGGAACAAGATTTCGGAAACTTTCAAAACAGAGAAAAGATGCGAGTGGAAAAGGCATTACGTCAGCTTTATGGTCGTTTCTTTTACCGATTTCCAGATGGAGAATCGGCTGCTGATGTATATGATAGAATCACAGGATTCAGAGAAACGCTGAGAACAGATATTAATATTGGACGGTATCAGCCACCTGGGGATAAGAAAACAGAGATGAACCTGGTGATCGTGTCGCACGGTCTAACACTTAGAGTTTTTCTGATGAGGTGGTACAAGTGGACGGTCCAACAGTTCGAGGGTCTCCACAACATGGGCAACGGAAATATGCTTGTCATGGAAAAGGGTTATGGTGGAAGGTATAGCTTGCTGATGCATCATGATGAAGAAGAGCTGAGACGGTTTGGATTGACTGATGAAATGCTGATTGATCAGGAGTGGCATAAAGTTGCGAAGCCTGCTGATCTGAATTACGATTGTCCAATGGTAAATTCCTTCTTTCCTCACCTCCGCGAAGAAACAAGCAGGTGTGAACAGGGAGCGTGA 1056 0.4631 MNLPLPFTTERIIGMAVVPFPYSGTPTLSSLPLSQQKGLKTNPNTSSLIQCCHSLKSSNGQARFEEKLHPETEAVPPRPRRIILVRHGESEGNVDESVYTRIPDPKIPLTEKGKLQSQECGHRIKKMIQKDAHQHWQVYFYVSPYRRTLQTLQNLARPFQRSRIAGFREEPRIREQDFGNFQNREKMRVEKALRQLYGRFFYRFPDGESAADVYDRITGFRETLRTDINIGRYQPPGDKKTEMNLVIVSHGLTLRVFLMRWYKWTVQQFEGLHNMGNGNMLVMEKGYGGRYSLLMHHDEEELRRFGLTDEMLIDQEWHKVAKPADLNYDCPMVNSFFPHLREETSRCEQGA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01808 351 Gene3D - 78 314 IPR029033 -
Cca06g01808 351 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 46 340 - -
Cca06g01808 351 CDD HP_PGM_like 81 284 IPR013078 -
Cca06g01808 351 Pfam Histidine phosphatase superfamily (branch 1) 82 284 IPR013078 -
Cca06g01808 351 PANTHER OS06G0109000 PROTEIN 46 340 - -
Cca06g01808 351 SUPERFAMILY Phosphoglycerate mutase-like 79 298 IPR029033 -
Cca06g01808 351 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 84 93 IPR001345 GO:0003824
Cca06g01808 351 SMART PGAM_5 81 257 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01808 Cca-Chr6 33486483 33488742 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01808 - - gmx:100800012 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01808 06 33486483 33488742 Cca06g01808 06 33486483 33488742 ECH