Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01806 ATGGCTTCGCAGCAGCAGCATATGGAGAAGATGGAGGTTCGCAAGAACTACCGCAATCTCTGGCACACTGATCTCTTAAACACCATTCACTCTGACACCCCTTATTGTTGTTTTGCTCTCTGGTGTGCACCGTGTGTATCATATCTGCTCCGCAAACGAGCTCTTTACGATGATATGTCAAGATACACATGTTGTGCTGGTTACATGCCCTGCAGTGGTCGGTGTGGAGAAAGTCAATGTCCTGAATTCTGCCTTTGCGCGGAGGTTATCTGTTGTTTTGGAAATTCAGTGGCCTCAACTCGATTTCTGTTACAAGATGAATTTAATATTCAAACTACGCAATGTGATAATTGCATCATTGCTTTCATGTTTATCCTTCAACAACTAGCGTGCATATTTTCCATTATTGCTTTAATTGTGGGAAATAGTGAAATTCGACAGGCTTCTCAATTGCTGTCTTGCTTAGCTGACTTTGTCTACTGCACGGTGTGTGCCTGCATGCAGACTCAGCATAAGATTGAAATGGACAAGCGTGATGAGAAATTTGGGCCTCAATCAGCGATGGGTATTCCTGGTTTTCAACAAATGTCACGCTTTGATCAGGCAGTCCCTCCTTTTGTTGGGTATGCACCACAACCAGCATATGGACAGGCCCATGGTTATTAA 666 0.4384 MASQQQHMEKMEVRKNYRNLWHTDLLNTIHSDTPYCCFALWCAPCVSYLLRKRALYDDMSRYTCCAGYMPCSGRCGESQCPEFCLCAEVICCFGNSVASTRFLLQDEFNIQTTQCDNCIIAFMFILQQLACIFSIIALIVGNSEIRQASQLLSCLADFVYCTVCACMQTQHKIEMDKRDEKFGPQSAMGIPGFQQMSRFDQAVPPFVGYAPQPAYGQAHGY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01806 221 PANTHER - 1 221 - -
Cca06g01806 221 PANTHER PLAC8 FAMILY PROTEIN 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01806 Cca-Chr6 33460716 33467812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01806 - - ccaj:109801375 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01806 06 33460716 33467812 Cca06g01806 06 33460716 33467812 ECH
Cca06g01806 06 33460716 33467812 Cca09g02452 09 49964144 49971296 PCT