Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca06g01793 | ATGAACAACTTCAAGTTAGGGGTAGATGTGGTTAGTGCTCACAATCTATTACCTAAAGATGGACAAGGTTCATCCAATGCATTTGTGGAACTGTACTTCGATGGCCAAAAGTTCCGTACGACCATAAAGGAAAGGGATCTTAACCCTGTTTGGAATGAGAGCTTCTACTTCAATATATCTGACCCTTCTAATCTTCACTATCTCACACTTGATGTCTATGTCCACTGCCATGCCAAGGCTACTAACTCCACTTCATTTCTCGGCAAGGCTAGCCTTACTGGGACTTCTTTTGTCCCTTACTGTGATGCAGTTGTCATGCACTATCCATTGGAAAAGCGGGGTATGTTCTCTCGTGTAAGAGGAGAGATTGGCCTTAAAGTTTACATCACTAATGACTCAACCATAAAATCATCTGTTCCAACTCCTACAGTTGAGTCCATGGCAACAAACAATCCCAGCTCAGCACATGCAGAAGTTCGAGCACCTGTAAATTCAATGACAAATAGTTTGCCAAATGAAAAGGTTGAGTCAAGACACACATTCCATCATCTCCCTAACGCAAACCATCATCAGCACCAGCACCAACAACATTCCTCTGGCTTTGCAGATACTCATTATGTAACAAAGTATGAAGCTGATCAAATGAAATCTGAACCACAACCTATGAGGCTAGTACGCACTTCCACATCAGTACAACCAGTCGATTTTGCACTGAAGGAAACAAGTCCATATCTTGGCGGGGGAAGAGTTGTTGGGGGTCGAGTTATTCACAAAGACAAGACTGCTAGTACATATGATCTTGTGGAAAGGATGTACTTTCTGTATGTCAGGGTTGTCAAAGCCCGTGAGCTTCCTGCAATGGATGTTACTGGGAGTCTTGATCCATTTGTTGAGGTGAGAATTGGCAACTACAAAGGTATCACTAAACACTTTGATAAGAATCAAAGTCCTGAATGGAATCAGGTGTTTGCCTTTTCAAAGGACCGGATGCAAGCATCCGTACTAGATGTTGTGATCAAGGACAAGGATCTCATAAAAGATGATTTTGTAGGCATTGTGAGGTTTGACATAAATGAGGTTCCATTGAGAGTACCGCCAGATAGCCCTTTGGCACCAGAGTGGTACCGCCTTGAGGACAAGAAAGGGGAGAAGATAAAAGGTGAGTTGATGCTTGCTGTCTGGATTGGTACTCAAGCAGATGAGGCTTTTTCTGATGCATGGCATTCAGATGCAGCCACACCTGTTGACAGCACACATGCAATCTCTGCAGTGATGCGTTCAAAGGTCTATCATGCACCAAGATTATGGTATGTGCGTGTCAATGTGGTGGAGGCACAGGACTTGGTTCCTACAGAGAAAATGCGTTTCCCTGATGTGTATGCCAAGGTGCAGATTGGAAACCAAGTGCTGAAAACAAAGACAGTTCCGGCCAGAACACTAAGCGCACTCTGGAATGAGGATCTTGTGTTTGTTGCTGCTGAACCTTTTGAAGATCATTTAGTCATTTCGGTTGAAGACCGGGTGAGTCCCGGAAAAGATGAGATCATTGGGAGGGTCATCATACCACTGAACCTTGTGGAGAGGCGTGCGGATGATAGAATCATTCATTCTCGATGGTTCAACTTAGAAAAGCCAGTTGCTATAGATGTTGATCAGTTGAAGAAAGAAAAGTTCTCAAGCAGAATTCAGCTCCGTTTGTGTCTAGATGGAGGATATCATGTTCTTGATGAGTCGACTCATTACAGCAGCGATCTCCGCCCTACAGCAAAGCAACTGTGGAAGCCTCCAATTGGTGTTTTAGAACTTGGAGTGCTGAATGCTGTAGGTCTCCCCCCAATGAAAACAAGGGATAGTAGGGGCACATCTGACACATACTGTGTAGCAAAATATGGTCACAAATGGGTCAGAACAAGAACCATTGTTGATAATCTGTGTCCAAAGTACAACGAGCAATACACTTGGGAGGTTTTTGATCACGCCACAGTTCTTACAGTTGGTGTGTTTGACAACAGCCAAATCGGGGAAAAGGGTAATGGTTCTTCAAAGGACTTGAAAATTGGAAAGGTAAGAATTCGCATCTCTACTCTTGAAACAGGCAGGATTTATACTCACTCATATCCTTTGTTGGTTCTTCACGCAACCGGGATTAAGAAGATGGGTGAACTTCACCTAGCAATAAGGTTTTCATGCACTTCTTTTGCAAACATGCTTTACCTATACTCACGGCCACTGCTGCCAAAGATGCACTACATAAGGCCTTTCTCAGTGACGCAGCTAGACATGCTACGCCACCAAGCAATGAACATACTGGCGGCACGGCTAGGCCGAGCAGAGCCACCACTTCGCAAGGAAGTGGTGGAATACATGTCAGACGTAGACTCACACCTTTGGAGCATGCGGCGAAGCAAGGCGAATTTCTTCAGGCTCATGACTGTCTTCTCTGGTGTGTTTGCAGTTGGGAAGTGGTTTGGTGATATCTGCATGTGGAGGAATCCTATCACAACAGTGCTGGTTCATGTGCTGTTTCTCATGCTTGTTTGCTTCCCGGAATTGATCTTGCCAACTGTTTTCCTCTACATGTTTCTGATAGGGGTGTGGAACTTCAGGTATCGACCAAGGTACCCTCCTCACATGAACACAAGAATCTCACAGGCTGAGGCAGTGCACCAGGATGAGTTAGATGAAGAGTTTGACACTTTCCCCACGAGCAGAAACCCGGAGCTAGTGAGAATGAGGTATGATCGTTTGAGGAGTGTGGCTGGAAGGATTCAAACAGTGGTTGGTGATTTGGCCAGCCAGGGAGAGAGGATTCAGGCACTGTTAAGCTGGAGAGATCCACGTGCTACAGCCATATTCATCACATTCTGTCTCTTATCTGCGTTTGTACTGTATGTTACTCCTTTTCAAGCTGTGGCTGGTTTGGCAGGGTTTTACATCATGAGGCATCCAAGATTTCGCCACAGGCTGCCATGTACCCCAGTCAACTTTTTCCGGCGCCTGCCTGCAAGAACAGACAGTATGTTGTAG | 3027 | 0.4516 | MNNFKLGVDVVSAHNLLPKDGQGSSNAFVELYFDGQKFRTTIKERDLNPVWNESFYFNISDPSNLHYLTLDVYVHCHAKATNSTSFLGKASLTGTSFVPYCDAVVMHYPLEKRGMFSRVRGEIGLKVYITNDSTIKSSVPTPTVESMATNNPSSAHAEVRAPVNSMTNSLPNEKVESRHTFHHLPNANHHQHQHQQHSSGFADTHYVTKYEADQMKSEPQPMRLVRTSTSVQPVDFALKETSPYLGGGRVVGGRVIHKDKTASTYDLVERMYFLYVRVVKARELPAMDVTGSLDPFVEVRIGNYKGITKHFDKNQSPEWNQVFAFSKDRMQASVLDVVIKDKDLIKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKIKGELMLAVWIGTQADEAFSDAWHSDAATPVDSTHAISAVMRSKVYHAPRLWYVRVNVVEAQDLVPTEKMRFPDVYAKVQIGNQVLKTKTVPARTLSALWNEDLVFVAAEPFEDHLVISVEDRVSPGKDEIIGRVIIPLNLVERRADDRIIHSRWFNLEKPVAIDVDQLKKEKFSSRIQLRLCLDGGYHVLDESTHYSSDLRPTAKQLWKPPIGVLELGVLNAVGLPPMKTRDSRGTSDTYCVAKYGHKWVRTRTIVDNLCPKYNEQYTWEVFDHATVLTVGVFDNSQIGEKGNGSSKDLKIGKVRIRISTLETGRIYTHSYPLLVLHATGIKKMGELHLAIRFSCTSFANMLYLYSRPLLPKMHYIRPFSVTQLDMLRHQAMNILAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTVFSGVFAVGKWFGDICMWRNPITTVLVHVLFLMLVCFPELILPTVFLYMFLIGVWNFRYRPRYPPHMNTRISQAEAVHQDELDEEFDTFPTSRNPELVRMRYDRLRSVAGRIQTVVGDLASQGERIQALLSWRDPRATAIFITFCLLSAFVLYVTPFQAVAGLAGFYIMRHPRFRHRLPCTPVNFFRRLPARTDSML | 1008 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca06g01793 | 1008 | PANTHER | C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN | 4 | 1008 | - | - | |
| Cca06g01793 | 1008 | MobiDBLite | consensus disorder prediction | 139 | 159 | - | - | |
| Cca06g01793 | 1008 | Pfam | Plant phosphoribosyltransferase C-terminal | 853 | 1008 | IPR013583 | - | |
| Cca06g01793 | 1008 | Gene3D | C2 domain | 255 | 395 | IPR035892 | - | |
| Cca06g01793 | 1008 | Gene3D | C2 domain | 582 | 730 | IPR035892 | - | |
| Cca06g01793 | 1008 | Gene3D | C2 domain | 418 | 568 | IPR035892 | - | |
| Cca06g01793 | 1008 | ProSiteProfiles | C2 domain profile. | 255 | 375 | IPR000008 | - | |
| Cca06g01793 | 1008 | ProSiteProfiles | C2 domain profile. | 581 | 706 | IPR000008 | - | |
| Cca06g01793 | 1008 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 5 | 137 | IPR035892 | - | |
| Cca06g01793 | 1008 | ProSiteProfiles | C2 domain profile. | 1 | 108 | IPR000008 | - | |
| Cca06g01793 | 1008 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 436 | 589 | IPR035892 | - | |
| Cca06g01793 | 1008 | ProSiteProfiles | C2 domain profile. | 415 | 540 | IPR000008 | - | |
| Cca06g01793 | 1008 | CDD | C2B_MCTP_PRT_plant | 273 | 397 | - | - | |
| Cca06g01793 | 1008 | CDD | C2C_MCTP_PRT_plant | 437 | 587 | - | - | |
| Cca06g01793 | 1008 | CDD | C2D_MCTP_PRT_plant | 599 | 725 | - | - | |
| Cca06g01793 | 1008 | CDD | C2A_MCTP_PRT_plant | 5 | 130 | - | - | |
| Cca06g01793 | 1008 | Pfam | C2 domain | 436 | 540 | IPR000008 | - | |
| Cca06g01793 | 1008 | Pfam | C2 domain | 5 | 93 | IPR000008 | - | |
| Cca06g01793 | 1008 | Pfam | C2 domain | 274 | 368 | IPR000008 | - | |
| Cca06g01793 | 1008 | Pfam | C2 domain | 599 | 708 | IPR000008 | - | |
| Cca06g01793 | 1008 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 598 | 736 | IPR035892 | - | |
| Cca06g01793 | 1008 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 272 | 411 | IPR035892 | - | |
| Cca06g01793 | 1008 | SMART | C2_3c | 5 | 106 | IPR000008 | - | |
| Cca06g01793 | 1008 | SMART | C2_3c | 437 | 535 | IPR000008 | - | |
| Cca06g01793 | 1008 | SMART | C2_3c | 273 | 369 | IPR000008 | - | |
| Cca06g01793 | 1008 | SMART | C2_3c | 599 | 705 | IPR000008 | - | |
| Cca06g01793 | 1008 | Gene3D | C2 domain | 1 | 130 | IPR035892 | - | |
| Cca06g01793 | 1008 | PANTHER | C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN | 4 | 1008 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca06g01793 | Cca-Chr6 | 33283287 | 33288376 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Cca06g01793 | 174 | 1008 | Lipid Metabolism Gene Families | AT4G11610 | 78.404 | 0.0 | 1401 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca06g01793 | - | - | gmx:100777951 | 1920.98 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca06g01793 | 06 | 33283287 | 33288376 | Cca06g01793 | 06 | 33283287 | 33288376 | ECH |