Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01765 ATGATGAAAGGTACGAAGCGTTTGGCTGTGTCGGAACCCAACCAGGCCGATACCAACGAAACGCCGTTCCGGAATAAAAGAATAATGGAAGGATCCTTCTTTGATGTCCATAGGGCTGAACCATCCCAACAACCAAAGGTGGCAGCAGCAGCACCACCGTTGGATATGAAACGGGCAGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGTTGGGTTCAAACACAACTAAAGAATCATCCTGATGAGCTTTGGGATGATGGTGTCAGAGATTACTTAGATCATGCTTCAAGCATTATGGAAAAGTTTAGTGATGTTGTCAATTGGCTCAAAGCAAATGCCACCCAGACAGAAAATTCATCTGCTGATGCTGGTGCTACTTTTTCTGGGAAAAAACTCTTGCCTGAAGCAATAAACAAAGAAAATAAGCCTTTTGAAGAAAAAGCTGGGTCTACTCCTGCTAGTACTGCCACAAATTTTGCTAGTTCTTGGAGCCCTGGGTTATTTTCAAACAGCCAAAACATTTTTGCATTTGGAAATCAAAGTTCAGCTCCCTCTAACAACAATGCTTCAGATGATGTAGATGGTGAAAATGAATTAGAGCAACCTAGCAGCCCATCAGTTAAGAAGTCAGAAGAGAAAGGTGTAGTTGTTGTACATGAAGTAAAGTGCAAACTTTATGTGAAGTCAAGTGATCCAGCAGATAAAGATGTATGGAAAGATAAAGGAATGGGCAAACTGTCTATTAAATGCAAAGAGGGTGTTAGCAAGGCTACCAAAGAGTCCAAACCTACAATTGTTGTTCGAAACGAGGTAGGAAAAATTCTTCTCAATGCCTTGTTGTATCCGGGAATCAAGACAAATCTGCAGAAGAACTCTCTTGTTGCAATATTCCATACTTCGGGTAATGCTGACGGAAGTGGAGATAACGATAGTGTTGTTGCACGTACATTCTTGATCCGGATGAAAACAGAAGATGATCGAAATAAACTTGCTTCAACCATCCAAGAATATGCTCCAGTTTCTTGA 1041 0.4131 MMKGTKRLAVSEPNQADTNETPFRNKRIMEGSFFDVHRAEPSQQPKVAAAAPPLDMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWDDGVRDYLDHASSIMEKFSDVVNWLKANATQTENSSADAGATFSGKKLLPEAINKENKPFEEKAGSTPASTATNFASSWSPGLFSNSQNIFAFGNQSSAPSNNNASDDVDGENELEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSSDPADKDVWKDKGMGKLSIKCKEGVSKATKESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSLVAIFHTSGNADGSGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01765 346 MobiDBLite consensus disorder prediction 1 24 - -
Cca06g01765 346 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 6 344 - -
Cca06g01765 346 SMART ranbd_3 204 342 IPR000156 GO:0046907
Cca06g01765 346 CDD RanBD_NUP50 216 343 - -
Cca06g01765 346 Pfam RanBP1 domain 212 341 IPR000156 GO:0046907
Cca06g01765 346 Gene3D - 113 345 IPR011993 -
Cca06g01765 346 SUPERFAMILY PH domain-like 214 343 - -
Cca06g01765 346 MobiDBLite consensus disorder prediction 183 217 - -
Cca06g01765 346 PANTHER RAN BINDING PROTEIN 6 344 IPR045255 -
Cca06g01765 346 ProSiteProfiles Ran binding domain type 1 profile. 214 341 IPR000156 GO:0046907
Cca06g01765 346 MobiDBLite consensus disorder prediction 183 197 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01765 K14295 - gmx:100816975 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01765 06 32951584 32970409 Cca06g01765 06 32951584 32970409 ECH